Protein–RNA interactions for Protein: Q6KCD5

Nipbl, Nipped-B-like protein, mousemouse

Known RBP Predictions only

Length 2,798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NipblQ6KCD5 Gm43463-201ENSMUST00000195967 1803 ntBASIC8.34□□□□□ -1.07
NipblQ6KCD5 Myl7-201ENSMUST00000102921 590 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Gm15476-201ENSMUST00000118247 1191 ntBASIC8.34□□□□□ -1.07
NipblQ6KCD5 Gm10639-202ENSMUST00000121273 873 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Gm16288-201ENSMUST00000137940 367 ntBASIC8.34□□□□□ -1.07
NipblQ6KCD5 Gm25154-201ENSMUST00000157123 119 ntBASIC8.34□□□□□ -1.07
NipblQ6KCD5 Gm23027-201ENSMUST00000158771 158 ntBASIC8.34□□□□□ -1.07
NipblQ6KCD5 Gm17197-201ENSMUST00000163160 452 ntTSL 2 BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Ighv1-33-201ENSMUST00000193220 350 ntBASIC8.34□□□□□ -1.07
NipblQ6KCD5 Gm42620-201ENSMUST00000197715 630 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NipblQ6KCD5 AC068459.1-201ENSMUST00000222492 905 ntTSL 3 BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Gm46376-201ENSMUST00000222653 654 ntTSL 3 BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NipblQ6KCD5 BC048562-201ENSMUST00000057265 690 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NipblQ6KCD5 9630028H03Rik-202ENSMUST00000153402 1559 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
NipblQ6KCD5 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Gm38192-201ENSMUST00000194364 1847 ntBASIC8.34□□□□□ -1.07
NipblQ6KCD5 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NipblQ6KCD5 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC8.34□□□□□ -1.08
NipblQ6KCD5 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Gm25804-201ENSMUST00000122785 188 ntBASIC8.33□□□□□ -1.08
NipblQ6KCD5 6330418K02Rik-202ENSMUST00000125662 1267 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Wars2-205ENSMUST00000198044 403 ntTSL 3 BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Gm34237-201ENSMUST00000220575 1257 ntTSL 5 BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Gm42467-201ENSMUST00000202954 1447 ntBASIC8.33□□□□□ -1.08
NipblQ6KCD5 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Acsl1-201ENSMUST00000034046 3897 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Gabarap-202ENSMUST00000108592 750 ntTSL 3 BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Gm7781-201ENSMUST00000117258 788 ntBASIC8.33□□□□□ -1.08
NipblQ6KCD5 Gm5944-201ENSMUST00000118182 1001 ntBASIC8.33□□□□□ -1.08
NipblQ6KCD5 Gm15727-201ENSMUST00000122416 437 ntBASIC8.33□□□□□ -1.08
NipblQ6KCD5 Gm8488-201ENSMUST00000176112 1280 ntBASIC8.33□□□□□ -1.08
NipblQ6KCD5 Gm26611-201ENSMUST00000181449 785 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC8.33□□□□□ -1.08
NipblQ6KCD5 AC154435.1-201ENSMUST00000223938 959 ntBASIC8.33□□□□□ -1.08
NipblQ6KCD5 3110009E18Rik-202ENSMUST00000056038 401 ntTSL 5 BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Pla2g2a-201ENSMUST00000077582 784 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Apool-201ENSMUST00000026599 1359 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 AC153524.2-202ENSMUST00000220401 1794 ntBASIC8.33□□□□□ -1.08
NipblQ6KCD5 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 AC155245.1-201ENSMUST00000222266 1804 ntBASIC8.33□□□□□ -1.08
NipblQ6KCD5 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Gm21939-201ENSMUST00000221137 2773 ntBASIC8.33□□□□□ -1.08
NipblQ6KCD5 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NipblQ6KCD5 Gm37270-201ENSMUST00000194277 330 ntBASIC8.33□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms