Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 AC134860.5-201ENSMUST00000225071 1249 ntBASIC9.92□□□□□ -0.82
VcanQ62059 Spp2-201ENSMUST00000027518 928 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
VcanQ62059 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
VcanQ62059 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
VcanQ62059 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
VcanQ62059 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
VcanQ62059 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
VcanQ62059 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
VcanQ62059 Gm10110-202ENSMUST00000228705 3220 ntBASIC9.92□□□□□ -0.82
VcanQ62059 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
VcanQ62059 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC9.92□□□□□ -0.82
VcanQ62059 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC9.92□□□□□ -0.82
VcanQ62059 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
VcanQ62059 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
VcanQ62059 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
VcanQ62059 Gm42602-201ENSMUST00000200288 3224 ntBASIC9.92□□□□□ -0.82
VcanQ62059 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
VcanQ62059 Rhox1-201ENSMUST00000115210 883 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
VcanQ62059 Anks1b-209ENSMUST00000182083 416 ntTSL 2 BASIC9.92□□□□□ -0.82
VcanQ62059 Cyp2e1-203ENSMUST00000210235 1012 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
VcanQ62059 Gm45846-201ENSMUST00000211170 446 ntTSL 2 BASIC9.92□□□□□ -0.82
VcanQ62059 Tpm1-203ENSMUST00000050905 1259 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
VcanQ62059 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
VcanQ62059 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
VcanQ62059 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC9.92□□□□□ -0.82
VcanQ62059 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
VcanQ62059 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
VcanQ62059 Pdcd1lg2-201ENSMUST00000112576 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VcanQ62059 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VcanQ62059 Gm10031-201ENSMUST00000190422 2653 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
VcanQ62059 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
VcanQ62059 Apba2-206ENSMUST00000206246 3027 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
VcanQ62059 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
VcanQ62059 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VcanQ62059 Gm10086-201ENSMUST00000136334 354 ntBASIC9.91□□□□□ -0.82
VcanQ62059 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VcanQ62059 Rsl24d1-203ENSMUST00000165177 597 ntTSL 3 BASIC9.91□□□□□ -0.82
VcanQ62059 Gm46189-201ENSMUST00000219395 644 ntTSL 3 BASIC9.91□□□□□ -0.82
VcanQ62059 1700029N11Rik-203ENSMUST00000220639 1092 ntTSL 5 BASIC9.91□□□□□ -0.82
VcanQ62059 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
VcanQ62059 Cog3-203ENSMUST00000227473 4197 ntBASIC9.91□□□□□ -0.82
VcanQ62059 Gm6727-201ENSMUST00000204102 1518 ntBASIC9.91□□□□□ -0.82
VcanQ62059 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VcanQ62059 Adh1-201ENSMUST00000004232 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VcanQ62059 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
VcanQ62059 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
VcanQ62059 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC9.91□□□□□ -0.82
VcanQ62059 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VcanQ62059 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VcanQ62059 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC9.91□□□□□ -0.82
VcanQ62059 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VcanQ62059 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VcanQ62059 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VcanQ62059 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VcanQ62059 Rab3b-203ENSMUST00000106651 1078 ntTSL 5 BASIC9.91□□□□□ -0.82
VcanQ62059 Gstm6-204ENSMUST00000106684 1179 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VcanQ62059 S100a16-205ENSMUST00000107334 879 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
VcanQ62059 Gm16548-201ENSMUST00000133341 1226 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VcanQ62059 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
VcanQ62059 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VcanQ62059 Tmem265-202ENSMUST00000190278 587 ntTSL 3 BASIC9.91□□□□□ -0.82
VcanQ62059 Gm7761-201ENSMUST00000190510 921 ntBASIC9.91□□□□□ -0.82
VcanQ62059 Msra-204ENSMUST00000210363 1042 ntTSL 5 BASIC9.91□□□□□ -0.82
VcanQ62059 Defa21-201ENSMUST00000076754 418 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VcanQ62059 Rpl15-ps3-201ENSMUST00000088480 615 ntBASIC9.91□□□□□ -0.82
VcanQ62059 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC9.91□□□□□ -0.82
VcanQ62059 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VcanQ62059 Prim1-201ENSMUST00000026461 1583 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
VcanQ62059 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
VcanQ62059 Olfr543-202ENSMUST00000219647 1456 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
VcanQ62059 Gm18806-201ENSMUST00000207607 1775 ntBASIC9.91□□□□□ -0.82
VcanQ62059 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VcanQ62059 Sdcbp2-201ENSMUST00000028950 1399 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VcanQ62059 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
VcanQ62059 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VcanQ62059 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VcanQ62059 Cd1d1-201ENSMUST00000029717 1946 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VcanQ62059 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
VcanQ62059 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC9.91□□□□□ -0.82
VcanQ62059 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VcanQ62059 Gm44153-201ENSMUST00000204162 1580 ntBASIC9.91□□□□□ -0.82
VcanQ62059 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VcanQ62059 Hmgn2-203ENSMUST00000102553 1265 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
VcanQ62059 Gm5389-201ENSMUST00000120893 1176 ntBASIC9.91□□□□□ -0.82
VcanQ62059 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VcanQ62059 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC9.91□□□□□ -0.82
VcanQ62059 Gm8616-201ENSMUST00000222175 1037 ntBASIC9.91□□□□□ -0.82
VcanQ62059 Gm21818-202ENSMUST00000225144 894 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
VcanQ62059 Atf7-201ENSMUST00000096143 390 ntBASIC9.91□□□□□ -0.82
VcanQ62059 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
VcanQ62059 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC9.9□□□□□ -0.82
VcanQ62059 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
VcanQ62059 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
VcanQ62059 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
VcanQ62059 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
VcanQ62059 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
VcanQ62059 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
VcanQ62059 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
VcanQ62059 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
VcanQ62059 1700056N10Rik-201ENSMUST00000141875 1043 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms