Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ddx49Q4FZF3 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ddx49Q4FZF3 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx49Q4FZF3 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx49Q4FZF3 Gm17836-201ENSMUST00000191976 1302 ntBASIC12.82□□□□□ -0.36
Ddx49Q4FZF3 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.82□□□□□ -0.36
Ddx49Q4FZF3 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ddx49Q4FZF3 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.82□□□□□ -0.36
Ddx49Q4FZF3 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx49Q4FZF3 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx49Q4FZF3 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx49Q4FZF3 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx49Q4FZF3 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Gm16209-201ENSMUST00000118457 627 ntBASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Gm15815-201ENSMUST00000120569 255 ntBASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Gm10171-201ENSMUST00000126220 628 ntBASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Gm5808-201ENSMUST00000178090 357 ntBASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Mrip-ps-201ENSMUST00000184613 940 ntBASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Gm37851-201ENSMUST00000193871 889 ntBASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Gm6352-201ENSMUST00000203583 1134 ntBASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Gm45258-201ENSMUST00000210042 853 ntBASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Nsmce2-203ENSMUST00000227173 1122 ntBASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 AC134793.1-202ENSMUST00000227444 803 ntBASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Gm10233-201ENSMUST00000089275 628 ntBASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx49Q4FZF3 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.8□□□□□ -0.36
Ddx49Q4FZF3 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ddx49Q4FZF3 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC12.8□□□□□ -0.36
Ddx49Q4FZF3 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx49Q4FZF3 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx49Q4FZF3 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ddx49Q4FZF3 BC043934-202ENSMUST00000185694 2356 ntBASIC12.8□□□□□ -0.36
Ddx49Q4FZF3 AC166361.2-201ENSMUST00000219269 1415 ntBASIC12.8□□□□□ -0.36
Ddx49Q4FZF3 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx49Q4FZF3 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx49Q4FZF3 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx49Q4FZF3 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ddx49Q4FZF3 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx49Q4FZF3 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.8□□□□□ -0.36
Ddx49Q4FZF3 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx49Q4FZF3 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx49Q4FZF3 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
Ddx49Q4FZF3 Gm25288-201ENSMUST00000122800 265 ntBASIC12.8□□□□□ -0.36
Ddx49Q4FZF3 Gm5254-201ENSMUST00000188353 977 ntBASIC12.8□□□□□ -0.36
Ddx49Q4FZF3 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC12.8□□□□□ -0.36
Ddx49Q4FZF3 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC12.8□□□□□ -0.36
Ddx49Q4FZF3 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx49Q4FZF3 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC12.8□□□□□ -0.36
Ddx49Q4FZF3 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx49Q4FZF3 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ddx49Q4FZF3 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ddx49Q4FZF3 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx49Q4FZF3 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx49Q4FZF3 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx49Q4FZF3 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms