Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Syt17-201ENSMUST00000081574 2764 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Edar-201ENSMUST00000003312 3637 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Cnga3-201ENSMUST00000027288 3554 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Pklr-202ENSMUST00000107482 2902 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Arhgef10l-204ENSMUST00000105797 3507 ntTSL 5 BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Src-205ENSMUST00000109533 3813 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Cass4-201ENSMUST00000099061 3731 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 4930455D15Rik-201ENSMUST00000181632 1616 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Ccdc138-201ENSMUST00000036576 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Aplp2-201ENSMUST00000072634 3634 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 C230057M02Rik-201ENSMUST00000212334 3306 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 4932442E05Rik-201ENSMUST00000191892 2717 ntBASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Atg13-202ENSMUST00000076803 3551 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Gm38158-201ENSMUST00000194617 339 ntBASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Gm6082-201ENSMUST00000215204 454 ntBASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 AC134869.4-202ENSMUST00000224350 837 ntBASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Mettl6-204ENSMUST00000227595 1027 ntBASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Rhobtb1-201ENSMUST00000020101 4352 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Clcn1-201ENSMUST00000031894 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 AC155245.1-201ENSMUST00000222266 1804 ntBASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Ubap2l-220ENSMUST00000199834 3494 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 9130221F21Rik-201ENSMUST00000206867 2631 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Ilf3-204ENSMUST00000213603 3430 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Gm43807-201ENSMUST00000200678 1781 ntBASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Timm9-208ENSMUST00000221797 2564 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccbe1Q3MI99 Gm37567-201ENSMUST00000193241 2279 ntBASIC9.9□□□□□ -0.83
Ccbe1Q3MI99 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Ccbe1Q3MI99 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Ccbe1Q3MI99 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Ccbe1Q3MI99 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
Ccbe1Q3MI99 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Ccbe1Q3MI99 Apba2-206ENSMUST00000206246 3027 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Ccbe1Q3MI99 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.83
Ccbe1Q3MI99 Hspd1-ps4-201ENSMUST00000121815 1668 ntBASIC9.9□□□□□ -0.83
Ccbe1Q3MI99 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
Ccbe1Q3MI99 Tfdp1-203ENSMUST00000209396 2421 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Ccbe1Q3MI99 Snx31-201ENSMUST00000013755 2696 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccbe1Q3MI99 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ccbe1Q3MI99 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ccbe1Q3MI99 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ccbe1Q3MI99 Gm10860-201ENSMUST00000176934 1888 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ccbe1Q3MI99 Gimap8-203ENSMUST00000203509 3138 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccbe1Q3MI99 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC9.89□□□□□ -0.83
Ccbe1Q3MI99 Gm13302-201ENSMUST00000119405 1849 ntBASIC9.89□□□□□ -0.83
Ccbe1Q3MI99 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC9.89□□□□□ -0.83
Ccbe1Q3MI99 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccbe1Q3MI99 Parp3-201ENSMUST00000067218 2962 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccbe1Q3MI99 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccbe1Q3MI99 Ralgapb-202ENSMUST00000109485 6709 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ccbe1Q3MI99 Uroc1-201ENSMUST00000046128 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccbe1Q3MI99 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ccbe1Q3MI99 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ccbe1Q3MI99 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccbe1Q3MI99 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC9.89□□□□□ -0.83
Ccbe1Q3MI99 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Ccbe1Q3MI99 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC9.89□□□□□ -0.83
Ccbe1Q3MI99 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC9.89□□□□□ -0.83
Ccbe1Q3MI99 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC9.89□□□□□ -0.83
Ccbe1Q3MI99 Insig2-208ENSMUST00000160968 1204 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Ccbe1Q3MI99 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ccbe1Q3MI99 Gm28882-201ENSMUST00000185504 314 ntBASIC9.89□□□□□ -0.83
Ccbe1Q3MI99 Gm37201-201ENSMUST00000191845 523 ntBASIC9.89□□□□□ -0.83
Ccbe1Q3MI99 Gm6621-201ENSMUST00000193251 772 ntBASIC9.89□□□□□ -0.83
Ccbe1Q3MI99 Gm37259-201ENSMUST00000193903 849 ntBASIC9.89□□□□□ -0.83
Ccbe1Q3MI99 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms