Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col19a1Q0VF58 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col19a1Q0VF58 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col19a1Q0VF58 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col19a1Q0VF58 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.66□□□□□ -0.54
Col19a1Q0VF58 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Gm38227-201ENSMUST00000193036 1602 ntBASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Gm13071-201ENSMUST00000122237 376 ntBASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Apela-201ENSMUST00000124790 945 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Gm28845-201ENSMUST00000144760 733 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Faap24-203ENSMUST00000154597 831 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 AC151971.6-201ENSMUST00000216193 866 ntBASIC11.65□□□□□ -0.54
Col19a1Q0VF58 AC116589.8-201ENSMUST00000220945 364 ntTSL 2 BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Gm46376-201ENSMUST00000222653 654 ntTSL 3 BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Gm6378-201ENSMUST00000084199 444 ntBASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Gm5174-201ENSMUST00000171131 1423 ntBASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Ccser2-203ENSMUST00000182042 1420 ntTSL 5 BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col19a1Q0VF58 Ccdc83-201ENSMUST00000040413 1546 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Col19a1Q0VF58 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Col19a1Q0VF58 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Col19a1Q0VF58 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Col19a1Q0VF58 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Col19a1Q0VF58 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Col19a1Q0VF58 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC11.65□□□□□ -0.55
Col19a1Q0VF58 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Sh2d1a-203ENSMUST00000115070 782 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Gm11929-201ENSMUST00000118175 945 ntBASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Cyp2j15-ps-201ENSMUST00000122267 686 ntBASIC11.64□□□□□ -0.55
Col19a1Q0VF58 1700112J05Rik-201ENSMUST00000129353 793 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Gm23916-201ENSMUST00000158484 399 ntBASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Ighv1-8-201ENSMUST00000192236 293 ntBASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Gm30652-201ENSMUST00000199103 430 ntBASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 4930547H16Rik-201ENSMUST00000222281 907 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 AC125117.2-201ENSMUST00000228344 1140 ntBASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Gm33466-201ENSMUST00000199819 1689 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Gm5697-201ENSMUST00000122295 2482 ntBASIC11.64□□□□□ -0.55
Col19a1Q0VF58 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Col19a1Q0VF58 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms