Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.84□□□□□ -0.51
Col9a2Q07643 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC11.84□□□□□ -0.51
Col9a2Q07643 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col9a2Q07643 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col9a2Q07643 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Col9a2Q07643 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col9a2Q07643 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col9a2Q07643 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col9a2Q07643 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col9a2Q07643 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Col9a2Q07643 AC154528.2-201ENSMUST00000228432 3023 ntBASIC11.84□□□□□ -0.51
Col9a2Q07643 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col9a2Q07643 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col9a2Q07643 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a2Q07643 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a2Q07643 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a2Q07643 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a2Q07643 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Col9a2Q07643 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a2Q07643 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a2Q07643 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC11.83□□□□□ -0.52
Col9a2Q07643 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a2Q07643 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a2Q07643 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a2Q07643 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a2Q07643 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a2Q07643 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC11.83□□□□□ -0.52
Col9a2Q07643 Gm8659-201ENSMUST00000120024 1084 ntBASIC11.83□□□□□ -0.52
Col9a2Q07643 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a2Q07643 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC11.83□□□□□ -0.52
Col9a2Q07643 Gm24346-201ENSMUST00000158712 194 ntBASIC11.83□□□□□ -0.52
Col9a2Q07643 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC11.83□□□□□ -0.52
Col9a2Q07643 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a2Q07643 Gm27956-201ENSMUST00000175604 260 ntBASIC11.83□□□□□ -0.52
Col9a2Q07643 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Col9a2Q07643 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC11.83□□□□□ -0.52
Col9a2Q07643 Mir6973a-201ENSMUST00000183646 78 ntBASIC11.83□□□□□ -0.52
Col9a2Q07643 Gm7047-201ENSMUST00000196224 1063 ntBASIC11.83□□□□□ -0.52
Col9a2Q07643 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC11.83□□□□□ -0.52
Col9a2Q07643 Gm8162-201ENSMUST00000213951 665 ntBASIC11.83□□□□□ -0.52
Col9a2Q07643 AC124581.2-201ENSMUST00000225459 282 ntBASIC11.83□□□□□ -0.52
Col9a2Q07643 AC121567.1-201ENSMUST00000227213 842 ntBASIC11.83□□□□□ -0.52
Col9a2Q07643 Gm6478-201ENSMUST00000099450 742 ntBASIC11.83□□□□□ -0.52
Col9a2Q07643 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Col9a2Q07643 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a2Q07643 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a2Q07643 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC11.83□□□□□ -0.52
Col9a2Q07643 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a2Q07643 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a2Q07643 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a2Q07643 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a2Q07643 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a2Q07643 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a2Q07643 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a2Q07643 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Col9a2Q07643 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Col9a2Q07643 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Col9a2Q07643 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a2Q07643 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a2Q07643 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Col9a2Q07643 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Col9a2Q07643 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a2Q07643 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a2Q07643 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a2Q07643 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC11.82□□□□□ -0.52
Col9a2Q07643 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a2Q07643 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a2Q07643 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a2Q07643 Gm42970-201ENSMUST00000196407 1352 ntBASIC11.82□□□□□ -0.52
Col9a2Q07643 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC11.82□□□□□ -0.52
Col9a2Q07643 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a2Q07643 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Col9a2Q07643 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a2Q07643 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
Col9a2Q07643 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Col9a2Q07643 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a2Q07643 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a2Q07643 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.82□□□□□ -0.52
Col9a2Q07643 Gm22594-201ENSMUST00000104251 130 ntBASIC11.82□□□□□ -0.52
Col9a2Q07643 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a2Q07643 Gm8152-201ENSMUST00000120842 637 ntBASIC11.82□□□□□ -0.52
Col9a2Q07643 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a2Q07643 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC11.82□□□□□ -0.52
Col9a2Q07643 Gm7255-201ENSMUST00000187371 908 ntBASIC11.82□□□□□ -0.52
Col9a2Q07643 Gm37782-201ENSMUST00000194879 678 ntBASIC11.82□□□□□ -0.52
Col9a2Q07643 Gm44498-201ENSMUST00000199509 111 ntBASIC11.82□□□□□ -0.52
Col9a2Q07643 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.82□□□□□ -0.52
Col9a2Q07643 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC11.82□□□□□ -0.52
Col9a2Q07643 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Col9a2Q07643 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a2Q07643 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC11.82□□□□□ -0.52
Col9a2Q07643 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a2Q07643 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a2Q07643 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a2Q07643 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Col9a2Q07643 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Col9a2Q07643 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a2Q07643 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a2Q07643 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a2Q07643 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms