Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm5738-201ENSMUST00000206016 779 ntBASIC13.71□□□□□ -0.21
Smarcc1P97496 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC13.71□□□□□ -0.21
Smarcc1P97496 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC13.71□□□□□ -0.21
Smarcc1P97496 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Smarcc1P97496 AC125409.3-201ENSMUST00000223488 653 ntBASIC13.71□□□□□ -0.21
Smarcc1P97496 Gm5424-201ENSMUST00000053865 1240 ntBASIC13.71□□□□□ -0.21
Smarcc1P97496 Gm8730-201ENSMUST00000076373 954 ntBASIC13.71□□□□□ -0.21
Smarcc1P97496 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Smarcc1P97496 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcc1P97496 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcc1P97496 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcc1P97496 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcc1P97496 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcc1P97496 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smarcc1P97496 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Smarcc1P97496 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smarcc1P97496 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smarcc1P97496 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smarcc1P97496 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
Smarcc1P97496 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Smarcc1P97496 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Smarcc1P97496 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Smarcc1P97496 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC13.71□□□□□ -0.22
Smarcc1P97496 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
Smarcc1P97496 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Smarcc1P97496 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc1P97496 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc1P97496 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc1P97496 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Smarcc1P97496 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc1P97496 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc1P97496 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc1P97496 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc1P97496 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc1P97496 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC13.7□□□□□ -0.22
Smarcc1P97496 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc1P97496 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc1P97496 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc1P97496 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Smarcc1P97496 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc1P97496 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC13.7□□□□□ -0.22
Smarcc1P97496 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc1P97496 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC13.7□□□□□ -0.22
Smarcc1P97496 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc1P97496 Gm5274-201ENSMUST00000182641 1003 ntBASIC13.7□□□□□ -0.22
Smarcc1P97496 Gm7833-201ENSMUST00000183288 990 ntBASIC13.7□□□□□ -0.22
Smarcc1P97496 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC13.7□□□□□ -0.22
Smarcc1P97496 Gm38038-201ENSMUST00000193803 259 ntBASIC13.7□□□□□ -0.22
Smarcc1P97496 Gm43106-201ENSMUST00000199485 637 ntBASIC13.7□□□□□ -0.22
Smarcc1P97496 Gm42803-201ENSMUST00000201051 451 ntBASIC13.7□□□□□ -0.22
Smarcc1P97496 Gm18164-201ENSMUST00000213769 927 ntBASIC13.7□□□□□ -0.22
Smarcc1P97496 Gm18166-201ENSMUST00000215557 927 ntBASIC13.7□□□□□ -0.22
Smarcc1P97496 Gm29689-201ENSMUST00000221076 589 ntBASIC13.7□□□□□ -0.22
Smarcc1P97496 AC160929.1-201ENSMUST00000221247 415 ntBASIC13.7□□□□□ -0.22
Smarcc1P97496 Gm10254-201ENSMUST00000052888 867 ntBASIC13.7□□□□□ -0.22
Smarcc1P97496 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc1P97496 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Smarcc1P97496 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc1P97496 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc1P97496 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc1P97496 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc1P97496 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc1P97496 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Smarcc1P97496 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Smarcc1P97496 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc1P97496 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc1P97496 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc1P97496 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.7□□□□□ -0.22
Smarcc1P97496 Rgr-203ENSMUST00000225070 4704 ntBASIC13.7□□□□□ -0.22
Smarcc1P97496 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc1P97496 Gm43075-201ENSMUST00000198613 3905 ntBASIC13.7□□□□□ -0.22
Smarcc1P97496 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc1P97496 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcc1P97496 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.69□□□□□ -0.22
Smarcc1P97496 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcc1P97496 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcc1P97496 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Smarcc1P97496 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcc1P97496 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcc1P97496 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcc1P97496 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcc1P97496 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Smarcc1P97496 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcc1P97496 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcc1P97496 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcc1P97496 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcc1P97496 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC13.69□□□□□ -0.22
Smarcc1P97496 Gm6939-201ENSMUST00000122029 864 ntBASIC13.69□□□□□ -0.22
Smarcc1P97496 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcc1P97496 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Smarcc1P97496 Gm25591-201ENSMUST00000177317 94 ntBASIC13.69□□□□□ -0.22
Smarcc1P97496 Gm20091-201ENSMUST00000179683 189 ntBASIC13.69□□□□□ -0.22
Smarcc1P97496 Gm6677-201ENSMUST00000195100 441 ntBASIC13.69□□□□□ -0.22
Smarcc1P97496 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC13.69□□□□□ -0.22
Smarcc1P97496 Gm5311-201ENSMUST00000203518 709 ntBASIC13.69□□□□□ -0.22
Smarcc1P97496 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Smarcc1P97496 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcc1P97496 AC154433.1-201ENSMUST00000224401 1183 ntBASIC13.69□□□□□ -0.22
Smarcc1P97496 Gm10581-201ENSMUST00000097986 231 ntBASIC13.69□□□□□ -0.22
Smarcc1P97496 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms