Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Gm9823-201ENSMUST00000051212 327 ntBASIC9.14□□□□□ -0.95
SgcaP82350 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SgcaP82350 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
SgcaP82350 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SgcaP82350 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
SgcaP82350 Nudt13-207ENSMUST00000224311 1574 ntBASIC9.14□□□□□ -0.95
SgcaP82350 Gm7103-201ENSMUST00000195642 1852 ntBASIC9.14□□□□□ -0.95
SgcaP82350 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SgcaP82350 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC9.14□□□□□ -0.95
SgcaP82350 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
SgcaP82350 Wwtr1-202ENSMUST00000120977 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
SgcaP82350 Mid1-204ENSMUST00000112104 3860 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
SgcaP82350 Mov10-203ENSMUST00000106775 3584 ntTSL 5 BASIC9.14□□□□□ -0.95
SgcaP82350 Mov10-206ENSMUST00000166979 3584 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SgcaP82350 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SgcaP82350 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC9.14□□□□□ -0.95
SgcaP82350 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
SgcaP82350 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SgcaP82350 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SgcaP82350 Gm45675-201ENSMUST00000211202 3429 ntBASIC9.14□□□□□ -0.95
SgcaP82350 Kctd7-201ENSMUST00000040616 4291 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SgcaP82350 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
SgcaP82350 Nudcd3-201ENSMUST00000066496 3927 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC9.13□□□□□ -0.95
SgcaP82350 Gabra5-203ENSMUST00000206734 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Zbtb26-201ENSMUST00000067043 5267 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Clasp2-203ENSMUST00000166734 4108 ntAPPRIS P3 TSL 5 BASIC9.13□□□□□ -0.95
SgcaP82350 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
SgcaP82350 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Mov10-201ENSMUST00000002297 3498 ntAPPRIS ALT1 TSL 5 BASIC9.13□□□□□ -0.95
SgcaP82350 Gm16478-201ENSMUST00000208113 5084 ntBASIC9.13□□□□□ -0.95
SgcaP82350 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
SgcaP82350 Gm16387-201ENSMUST00000180990 2632 ntBASIC9.13□□□□□ -0.95
SgcaP82350 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Celf1-208ENSMUST00000111455 7579 ntAPPRIS P4 TSL 5 BASIC9.13□□□□□ -0.95
SgcaP82350 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Gm1627-201ENSMUST00000188504 2588 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Slc7a14-202ENSMUST00000108245 3080 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
SgcaP82350 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC9.13□□□□□ -0.95
SgcaP82350 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC9.13□□□□□ -0.95
SgcaP82350 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Olfml3-204ENSMUST00000169286 874 ntBASIC9.13□□□□□ -0.95
SgcaP82350 Gm8343-201ENSMUST00000182705 994 ntBASIC9.13□□□□□ -0.95
SgcaP82350 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Gm43184-201ENSMUST00000197247 542 ntBASIC9.13□□□□□ -0.95
SgcaP82350 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Gm45856-201ENSMUST00000212752 416 ntBASIC9.13□□□□□ -0.95
SgcaP82350 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC9.13□□□□□ -0.95
SgcaP82350 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC9.13□□□□□ -0.95
SgcaP82350 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Gm10478-201ENSMUST00000084451 396 ntBASIC9.13□□□□□ -0.95
SgcaP82350 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
SgcaP82350 Gm5537-201ENSMUST00000091117 1252 ntBASIC9.13□□□□□ -0.95
SgcaP82350 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
SgcaP82350 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Sardh-202ENSMUST00000102886 4521 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Kat6b-207ENSMUST00000182855 6791 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Rreb1-207ENSMUST00000128570 8436 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
SgcaP82350 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
SgcaP82350 Ptk2b-202ENSMUST00000089250 3903 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Tec-201ENSMUST00000071944 2659 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Speer4b-201ENSMUST00000053257 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Tcaf1-201ENSMUST00000045054 5257 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Daam1-201ENSMUST00000085299 5879 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Sall4-203ENSMUST00000103074 3741 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SgcaP82350 Zfhx3-201ENSMUST00000043896 16433 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SgcaP82350 Trip11-201ENSMUST00000021605 9873 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SgcaP82350 Prdm1-204ENSMUST00000218369 2517 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
SgcaP82350 Gm6170-201ENSMUST00000187672 1388 ntBASIC9.12□□□□□ -0.95
SgcaP82350 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
SgcaP82350 Gm7357-201ENSMUST00000195361 2991 ntBASIC9.12□□□□□ -0.95
SgcaP82350 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SgcaP82350 Cacna1c-206ENSMUST00000185345 6579 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
SgcaP82350 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC9.12□□□□□ -0.95
SgcaP82350 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SgcaP82350 Npc1l1-201ENSMUST00000004505 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SgcaP82350 Gm43086-201ENSMUST00000202536 2657 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SgcaP82350 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SgcaP82350 Bcor-201ENSMUST00000043441 6113 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms