Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC9.84□□□□□ -0.83
SgcbP82349 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC9.84□□□□□ -0.83
SgcbP82349 Gm18871-201ENSMUST00000218655 745 ntBASIC9.84□□□□□ -0.83
SgcbP82349 AC132901.1-201ENSMUST00000224345 508 ntBASIC9.84□□□□□ -0.83
SgcbP82349 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SgcbP82349 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SgcbP82349 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
SgcbP82349 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
SgcbP82349 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
SgcbP82349 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
SgcbP82349 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SgcbP82349 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SgcbP82349 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
SgcbP82349 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC9.84□□□□□ -0.83
SgcbP82349 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
SgcbP82349 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SgcbP82349 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SgcbP82349 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SgcbP82349 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
SgcbP82349 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC9.84□□□□□ -0.83
SgcbP82349 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
SgcbP82349 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SgcbP82349 Olfr23-202ENSMUST00000214210 2527 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
SgcbP82349 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
SgcbP82349 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SgcbP82349 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SgcbP82349 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
SgcbP82349 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SgcbP82349 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
SgcbP82349 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC9.83□□□□□ -0.84
SgcbP82349 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcbP82349 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcbP82349 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcbP82349 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC9.83□□□□□ -0.84
SgcbP82349 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcbP82349 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
SgcbP82349 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcbP82349 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
SgcbP82349 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
SgcbP82349 Dio2-201ENSMUST00000082432 5815 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcbP82349 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SgcbP82349 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC9.83□□□□□ -0.84
SgcbP82349 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SgcbP82349 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
SgcbP82349 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcbP82349 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcbP82349 Gm18294-201ENSMUST00000176980 1748 ntBASIC9.83□□□□□ -0.84
SgcbP82349 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcbP82349 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SgcbP82349 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcbP82349 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
SgcbP82349 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
SgcbP82349 Gm6461-201ENSMUST00000120015 633 ntBASIC9.83□□□□□ -0.84
SgcbP82349 Gm15061-201ENSMUST00000121076 1046 ntBASIC9.83□□□□□ -0.84
SgcbP82349 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC9.83□□□□□ -0.84
SgcbP82349 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SgcbP82349 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
SgcbP82349 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
SgcbP82349 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
SgcbP82349 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SgcbP82349 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC9.83□□□□□ -0.84
SgcbP82349 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcbP82349 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC9.83□□□□□ -0.84
SgcbP82349 Gm3726-201ENSMUST00000203110 785 ntBASIC9.83□□□□□ -0.84
SgcbP82349 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC9.83□□□□□ -0.84
SgcbP82349 Gm9111-201ENSMUST00000219394 709 ntBASIC9.83□□□□□ -0.84
SgcbP82349 AC102569.1-201ENSMUST00000221563 685 ntBASIC9.83□□□□□ -0.84
SgcbP82349 AC153152.3-201ENSMUST00000222188 1135 ntBASIC9.83□□□□□ -0.84
SgcbP82349 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
SgcbP82349 Gm25580-201ENSMUST00000083409 327 ntBASIC9.83□□□□□ -0.84
SgcbP82349 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcbP82349 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SgcbP82349 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcbP82349 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcbP82349 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC9.83□□□□□ -0.84
SgcbP82349 Olfr55-202ENSMUST00000214888 4675 ntTSL 5 BASIC9.83□□□□□ -0.84
SgcbP82349 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcbP82349 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SgcbP82349 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SgcbP82349 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
SgcbP82349 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
SgcbP82349 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SgcbP82349 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcbP82349 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SgcbP82349 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcbP82349 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SgcbP82349 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcbP82349 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC9.82□□□□□ -0.84
SgcbP82349 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SgcbP82349 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
SgcbP82349 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SgcbP82349 Gm21136-201ENSMUST00000186812 2575 ntBASIC9.82□□□□□ -0.84
SgcbP82349 Gm6605-201ENSMUST00000031488 2574 ntBASIC9.82□□□□□ -0.84
SgcbP82349 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
SgcbP82349 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
SgcbP82349 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SgcbP82349 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
SgcbP82349 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SgcbP82349 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SgcbP82349 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms