Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC9.6□□□□□ -0.87
Lsm6P62313 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm6P62313 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm6P62313 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Lsm6P62313 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC9.6□□□□□ -0.87
Lsm6P62313 Gm12194-201ENSMUST00000117756 1012 ntBASIC9.6□□□□□ -0.87
Lsm6P62313 Gm12663-201ENSMUST00000118481 958 ntBASIC9.6□□□□□ -0.87
Lsm6P62313 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC9.6□□□□□ -0.87
Lsm6P62313 n-R5s14-201ENSMUST00000122688 107 ntBASIC9.6□□□□□ -0.87
Lsm6P62313 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC9.6□□□□□ -0.87
Lsm6P62313 Gm25226-201ENSMUST00000158198 123 ntBASIC9.6□□□□□ -0.87
Lsm6P62313 Mir5132-201ENSMUST00000175166 71 ntBASIC9.6□□□□□ -0.87
Lsm6P62313 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC9.6□□□□□ -0.87
Lsm6P62313 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC9.6□□□□□ -0.87
Lsm6P62313 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC9.6□□□□□ -0.87
Lsm6P62313 Gm42859-201ENSMUST00000199572 193 ntBASIC9.6□□□□□ -0.87
Lsm6P62313 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC9.6□□□□□ -0.87
Lsm6P62313 Gm8436-201ENSMUST00000210152 1080 ntBASIC9.6□□□□□ -0.87
Lsm6P62313 Gm5749-201ENSMUST00000210673 1090 ntBASIC9.6□□□□□ -0.87
Lsm6P62313 AC122346.3-201ENSMUST00000223983 306 ntBASIC9.6□□□□□ -0.87
Lsm6P62313 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm6P62313 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Lsm6P62313 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Lsm6P62313 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm6P62313 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC9.6□□□□□ -0.87
Lsm6P62313 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm6P62313 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm6P62313 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm6P62313 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm6P62313 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm6P62313 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm6P62313 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Lsm6P62313 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm6P62313 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
Lsm6P62313 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Lsm6P62313 Gm37954-201ENSMUST00000195400 2071 ntBASIC9.6□□□□□ -0.87
Lsm6P62313 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC9.6□□□□□ -0.87
Lsm6P62313 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Lsm6P62313 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm6P62313 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm6P62313 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm6P62313 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm6P62313 Gm43112-201ENSMUST00000196665 3122 ntBASIC9.6□□□□□ -0.87
Lsm6P62313 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Lsm6P62313 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lsm6P62313 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm6P62313 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm6P62313 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm6P62313 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC9.59□□□□□ -0.87
Lsm6P62313 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm6P62313 Gm37447-201ENSMUST00000195625 2928 ntBASIC9.59□□□□□ -0.87
Lsm6P62313 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm6P62313 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm6P62313 Gm6641-201ENSMUST00000196100 1315 ntBASIC9.59□□□□□ -0.87
Lsm6P62313 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm6P62313 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm6P62313 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm6P62313 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm6P62313 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm6P62313 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Lsm6P62313 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm6P62313 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Lsm6P62313 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm6P62313 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm6P62313 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC9.59□□□□□ -0.87
Lsm6P62313 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm6P62313 Gm11952-201ENSMUST00000121172 821 ntBASIC9.59□□□□□ -0.87
Lsm6P62313 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC9.59□□□□□ -0.87
Lsm6P62313 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm6P62313 Gm25343-201ENSMUST00000157460 107 ntBASIC9.59□□□□□ -0.87
Lsm6P62313 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm6P62313 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC9.59□□□□□ -0.87
Lsm6P62313 Gm6407-201ENSMUST00000176468 549 ntBASIC9.59□□□□□ -0.87
Lsm6P62313 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm6P62313 Gm37852-201ENSMUST00000193027 350 ntBASIC9.59□□□□□ -0.87
Lsm6P62313 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC9.59□□□□□ -0.87
Lsm6P62313 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm6P62313 Gm45550-201ENSMUST00000209380 946 ntBASIC9.59□□□□□ -0.87
Lsm6P62313 Gm2875-201ENSMUST00000211333 360 ntBASIC9.59□□□□□ -0.87
Lsm6P62313 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm6P62313 AC134248.1-201ENSMUST00000216113 1176 ntBASIC9.59□□□□□ -0.87
Lsm6P62313 Lgi3-203ENSMUST00000226548 1001 ntBASIC9.59□□□□□ -0.87
Lsm6P62313 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm6P62313 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm6P62313 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Lsm6P62313 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm6P62313 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm6P62313 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm6P62313 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm6P62313 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm6P62313 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Lsm6P62313 Gm17213-201ENSMUST00000165161 1360 ntBASIC9.59□□□□□ -0.87
Lsm6P62313 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm6P62313 Gm19027-201ENSMUST00000187291 1355 ntBASIC9.59□□□□□ -0.87
Lsm6P62313 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm6P62313 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm6P62313 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm6P62313 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm6P62313 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm6P62313 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms