Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup43P59235 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup43P59235 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Nup43P59235 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nup43P59235 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup43P59235 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup43P59235 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup43P59235 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Nup43P59235 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup43P59235 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup43P59235 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup43P59235 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC10.34□□□□□ -0.75
Nup43P59235 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup43P59235 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup43P59235 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup43P59235 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nup43P59235 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.33□□□□□ -0.76
Nup43P59235 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nup43P59235 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nup43P59235 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC10.33□□□□□ -0.76
Nup43P59235 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Nup43P59235 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nup43P59235 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nup43P59235 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nup43P59235 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nup43P59235 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nup43P59235 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Nup43P59235 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nup43P59235 Mir1893-201ENSMUST00000122565 83 ntBASIC10.33□□□□□ -0.76
Nup43P59235 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC10.33□□□□□ -0.76
Nup43P59235 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Nup43P59235 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nup43P59235 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC10.33□□□□□ -0.76
Nup43P59235 Gm16030-201ENSMUST00000159098 603 ntBASIC10.33□□□□□ -0.76
Nup43P59235 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Nup43P59235 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nup43P59235 Gm9081-201ENSMUST00000182346 991 ntBASIC10.33□□□□□ -0.76
Nup43P59235 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Nup43P59235 Gm28975-201ENSMUST00000186412 686 ntBASIC10.33□□□□□ -0.76
Nup43P59235 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC10.33□□□□□ -0.76
Nup43P59235 Gm28745-201ENSMUST00000190069 305 ntBASIC10.33□□□□□ -0.76
Nup43P59235 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC10.33□□□□□ -0.76
Nup43P59235 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC10.33□□□□□ -0.76
Nup43P59235 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC10.33□□□□□ -0.76
Nup43P59235 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC10.33□□□□□ -0.76
Nup43P59235 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC10.33□□□□□ -0.76
Nup43P59235 AC154461.3-201ENSMUST00000224831 573 ntBASIC10.33□□□□□ -0.76
Nup43P59235 AC115304.2-201ENSMUST00000226399 332 ntBASIC10.33□□□□□ -0.76
Nup43P59235 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nup43P59235 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nup43P59235 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nup43P59235 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nup43P59235 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
Nup43P59235 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nup43P59235 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nup43P59235 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Nup43P59235 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Nup43P59235 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nup43P59235 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC10.33□□□□□ -0.76
Nup43P59235 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nup43P59235 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nup43P59235 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nup43P59235 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nup43P59235 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nup43P59235 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nup43P59235 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Nup43P59235 Gm7405-201ENSMUST00000121476 1337 ntBASIC10.33□□□□□ -0.76
Nup43P59235 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nup43P59235 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Nup43P59235 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nup43P59235 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup43P59235 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC10.32□□□□□ -0.76
Nup43P59235 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Nup43P59235 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nup43P59235 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nup43P59235 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nup43P59235 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup43P59235 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Nup43P59235 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup43P59235 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup43P59235 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nup43P59235 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup43P59235 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup43P59235 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nup43P59235 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nup43P59235 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup43P59235 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup43P59235 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup43P59235 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.32□□□□□ -0.76
Nup43P59235 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup43P59235 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup43P59235 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nup43P59235 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC10.32□□□□□ -0.76
Nup43P59235 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup43P59235 Gm13019-201ENSMUST00000120000 276 ntBASIC10.32□□□□□ -0.76
Nup43P59235 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup43P59235 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC10.32□□□□□ -0.76
Nup43P59235 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup43P59235 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nup43P59235 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms