Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rrp1P56183 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rrp1P56183 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rrp1P56183 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC12.28□□□□□ -0.44
Rrp1P56183 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rrp1P56183 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rrp1P56183 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rrp1P56183 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.28□□□□□ -0.44
Rrp1P56183 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rrp1P56183 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Rrp1P56183 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
Rrp1P56183 Gm13611-201ENSMUST00000118269 318 ntBASIC12.28□□□□□ -0.44
Rrp1P56183 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rrp1P56183 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.28□□□□□ -0.44
Rrp1P56183 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rrp1P56183 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Rrp1P56183 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rrp1P56183 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Rrp1P56183 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rrp1P56183 Gm42997-202ENSMUST00000200321 985 ntBASIC12.28□□□□□ -0.44
Rrp1P56183 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rrp1P56183 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Rrp1P56183 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.28□□□□□ -0.44
Rrp1P56183 Ginm1-202ENSMUST00000065124 300 ntBASIC12.28□□□□□ -0.44
Rrp1P56183 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rrp1P56183 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rrp1P56183 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC12.28□□□□□ -0.44
Rrp1P56183 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rrp1P56183 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rrp1P56183 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rrp1P56183 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rrp1P56183 Gm37242-201ENSMUST00000191873 2085 ntBASIC12.28□□□□□ -0.44
Rrp1P56183 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rrp1P56183 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.28□□□□□ -0.44
Rrp1P56183 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Rrp1P56183 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Rrp1P56183 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rrp1P56183 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rrp1P56183 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rrp1P56183 Gm21142-201ENSMUST00000179999 2604 ntBASIC12.27□□□□□ -0.44
Rrp1P56183 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Rrp1P56183 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rrp1P56183 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rrp1P56183 Gm19040-201ENSMUST00000203280 4726 ntBASIC12.27□□□□□ -0.44
Rrp1P56183 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rrp1P56183 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rrp1P56183 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rrp1P56183 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.27□□□□□ -0.45
Rrp1P56183 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.27□□□□□ -0.45
Rrp1P56183 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC12.27□□□□□ -0.45
Rrp1P56183 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rrp1P56183 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Rrp1P56183 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Rrp1P56183 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.27□□□□□ -0.45
Rrp1P56183 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.27□□□□□ -0.45
Rrp1P56183 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Rrp1P56183 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rrp1P56183 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Rrp1P56183 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Rrp1P56183 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC12.27□□□□□ -0.45
Rrp1P56183 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rrp1P56183 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rrp1P56183 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rrp1P56183 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rrp1P56183 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rrp1P56183 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Rrp1P56183 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC12.27□□□□□ -0.45
Rrp1P56183 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rrp1P56183 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rrp1P56183 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rrp1P56183 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp1P56183 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC12.26□□□□□ -0.45
Rrp1P56183 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp1P56183 Gm44445-201ENSMUST00000204075 2683 ntBASIC12.26□□□□□ -0.45
Rrp1P56183 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp1P56183 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp1P56183 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp1P56183 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp1P56183 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp1P56183 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Rrp1P56183 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp1P56183 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Rrp1P56183 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp1P56183 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Rrp1P56183 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp1P56183 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp1P56183 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC12.26□□□□□ -0.45
Rrp1P56183 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Rrp1P56183 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp1P56183 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp1P56183 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp1P56183 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp1P56183 Gm20426-201ENSMUST00000173657 440 ntBASIC12.26□□□□□ -0.45
Rrp1P56183 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.26□□□□□ -0.45
Rrp1P56183 Gm40414-201ENSMUST00000197608 481 ntBASIC12.26□□□□□ -0.45
Rrp1P56183 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.26□□□□□ -0.45
Rrp1P56183 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp1P56183 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp1P56183 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp1P56183 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms