Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox1P53783 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox1P53783 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.23□□□□□ -0.61
Sox1P53783 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox1P53783 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox1P53783 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox1P53783 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox1P53783 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sox1P53783 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.23□□□□□ -0.61
Sox1P53783 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Sox1P53783 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox1P53783 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.22□□□□□ -0.61
Sox1P53783 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox1P53783 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox1P53783 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
Sox1P53783 Fhl3-202ENSMUST00000106199 1139 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Sox1P53783 Dtymk-203ENSMUST00000112893 1040 ntTSL 2 BASIC11.22□□□□□ -0.61
Sox1P53783 Gm15074-201ENSMUST00000117603 936 ntBASIC11.22□□□□□ -0.61
Sox1P53783 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox1P53783 Gm5764-201ENSMUST00000118817 885 ntBASIC11.22□□□□□ -0.61
Sox1P53783 Gm14538-201ENSMUST00000122019 1327 ntBASIC11.22□□□□□ -0.61
Sox1P53783 Grip1os1-201ENSMUST00000126965 1084 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox1P53783 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox1P53783 Gm15419-201ENSMUST00000148654 743 ntTSL 3 BASIC11.22□□□□□ -0.61
Sox1P53783 4930448D08Rik-201ENSMUST00000149958 1247 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox1P53783 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox1P53783 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox1P53783 Gm21963-201ENSMUST00000179519 330 ntBASIC11.22□□□□□ -0.61
Sox1P53783 Gm26698-201ENSMUST00000181290 971 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox1P53783 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Sox1P53783 Gm37293-201ENSMUST00000191658 295 ntBASIC11.22□□□□□ -0.61
Sox1P53783 Gm19058-201ENSMUST00000192135 598 ntBASIC11.22□□□□□ -0.61
Sox1P53783 Gm2328-201ENSMUST00000193525 535 ntBASIC11.22□□□□□ -0.61
Sox1P53783 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox1P53783 Gm37944-201ENSMUST00000194233 414 ntBASIC11.22□□□□□ -0.61
Sox1P53783 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.22□□□□□ -0.61
Sox1P53783 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.22□□□□□ -0.61
Sox1P53783 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox1P53783 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC11.22□□□□□ -0.61
Sox1P53783 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.22□□□□□ -0.61
Sox1P53783 Gm29783-201ENSMUST00000219398 369 ntBASIC11.22□□□□□ -0.61
Sox1P53783 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox1P53783 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox1P53783 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox1P53783 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox1P53783 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox1P53783 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.22□□□□□ -0.61
Sox1P53783 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox1P53783 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox1P53783 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Sox1P53783 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox1P53783 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Sox1P53783 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox1P53783 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox1P53783 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox1P53783 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox1P53783 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox1P53783 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox1P53783 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.21□□□□□ -0.61
Sox1P53783 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox1P53783 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.21□□□□□ -0.61
Sox1P53783 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.21□□□□□ -0.61
Sox1P53783 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sox1P53783 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox1P53783 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.21□□□□□ -0.61
Sox1P53783 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sox1P53783 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.21□□□□□ -0.61
Sox1P53783 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox1P53783 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox1P53783 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.21□□□□□ -0.61
Sox1P53783 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox1P53783 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox1P53783 Gm8864-201ENSMUST00000118653 1010 ntBASIC11.21□□□□□ -0.61
Sox1P53783 Gm11629-201ENSMUST00000123784 384 ntTSL 3 BASIC11.21□□□□□ -0.61
Sox1P53783 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC11.21□□□□□ -0.61
Sox1P53783 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC11.21□□□□□ -0.61
Sox1P53783 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sox1P53783 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC11.21□□□□□ -0.61
Sox1P53783 Gm5501-201ENSMUST00000165917 832 ntBASIC11.21□□□□□ -0.61
Sox1P53783 Atad3aos-204ENSMUST00000174185 482 ntTSL 3 BASIC11.21□□□□□ -0.61
Sox1P53783 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC11.21□□□□□ -0.61
Sox1P53783 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox1P53783 Gm6317-201ENSMUST00000183159 1000 ntBASIC11.21□□□□□ -0.61
Sox1P53783 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.21□□□□□ -0.61
Sox1P53783 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC11.21□□□□□ -0.61
Sox1P53783 4933436E23Rik-201ENSMUST00000192824 1111 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sox1P53783 Gm9353-201ENSMUST00000200472 604 ntBASIC11.21□□□□□ -0.61
Sox1P53783 AC151971.6-201ENSMUST00000216193 866 ntBASIC11.21□□□□□ -0.61
Sox1P53783 AC165092.1-201ENSMUST00000224018 486 ntBASIC11.21□□□□□ -0.61
Sox1P53783 AC123698.1-201ENSMUST00000227090 402 ntBASIC11.21□□□□□ -0.61
Sox1P53783 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox1P53783 Gm8174-201ENSMUST00000064353 1001 ntBASIC11.21□□□□□ -0.61
Sox1P53783 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox1P53783 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox1P53783 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sox1P53783 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sox1P53783 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sox1P53783 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sox1P53783 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Sox1P53783 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms