Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC9.88□□□□□ -0.83
Rfx3P48381 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Rfx3P48381 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Rfx3P48381 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC9.88□□□□□ -0.83
Rfx3P48381 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC9.87□□□□□ -0.83
Rfx3P48381 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rfx3P48381 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rfx3P48381 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Rfx3P48381 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rfx3P48381 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC9.87□□□□□ -0.83
Rfx3P48381 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rfx3P48381 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC9.87□□□□□ -0.83
Rfx3P48381 Gm12616-201ENSMUST00000118594 382 ntBASIC9.87□□□□□ -0.83
Rfx3P48381 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rfx3P48381 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC9.87□□□□□ -0.83
Rfx3P48381 Gm23045-201ENSMUST00000175041 96 ntBASIC9.87□□□□□ -0.83
Rfx3P48381 Gm12624-201ENSMUST00000177615 382 ntBASIC9.87□□□□□ -0.83
Rfx3P48381 Gm12621-201ENSMUST00000177760 382 ntBASIC9.87□□□□□ -0.83
Rfx3P48381 Gm12615-201ENSMUST00000177970 382 ntBASIC9.87□□□□□ -0.83
Rfx3P48381 Gm12622-201ENSMUST00000177975 382 ntBASIC9.87□□□□□ -0.83
Rfx3P48381 Gm12627-201ENSMUST00000178412 382 ntBASIC9.87□□□□□ -0.83
Rfx3P48381 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC9.87□□□□□ -0.83
Rfx3P48381 Gm12625-201ENSMUST00000179122 382 ntBASIC9.87□□□□□ -0.83
Rfx3P48381 Gm12614-201ENSMUST00000179586 382 ntBASIC9.87□□□□□ -0.83
Rfx3P48381 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC9.87□□□□□ -0.83
Rfx3P48381 Gm12613-201ENSMUST00000180323 382 ntBASIC9.87□□□□□ -0.83
Rfx3P48381 Gm19353-201ENSMUST00000184561 445 ntBASIC9.87□□□□□ -0.83
Rfx3P48381 Mrip-ps-201ENSMUST00000184613 940 ntBASIC9.87□□□□□ -0.83
Rfx3P48381 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Rfx3P48381 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC9.87□□□□□ -0.83
Rfx3P48381 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Rfx3P48381 Ighv5-11-201ENSMUST00000193354 371 ntBASIC9.87□□□□□ -0.83
Rfx3P48381 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC9.87□□□□□ -0.83
Rfx3P48381 Mir7686-201ENSMUST00000200604 57 ntBASIC9.87□□□□□ -0.83
Rfx3P48381 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
Rfx3P48381 Gm18393-201ENSMUST00000208349 1131 ntBASIC9.87□□□□□ -0.83
Rfx3P48381 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Rfx3P48381 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC9.87□□□□□ -0.83
Rfx3P48381 AC154680.1-201ENSMUST00000224376 859 ntBASIC9.87□□□□□ -0.83
Rfx3P48381 CT025602.2-201ENSMUST00000226553 772 ntBASIC9.87□□□□□ -0.83
Rfx3P48381 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Rfx3P48381 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC9.87□□□□□ -0.83
Rfx3P48381 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Rfx3P48381 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Rfx3P48381 AC129336.1-201ENSMUST00000220224 2277 ntBASIC9.87□□□□□ -0.83
Rfx3P48381 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Rfx3P48381 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Rfx3P48381 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rfx3P48381 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Rfx3P48381 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Rfx3P48381 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC9.87□□□□□ -0.83
Rfx3P48381 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rfx3P48381 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rfx3P48381 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Rfx3P48381 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Rfx3P48381 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Rfx3P48381 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Rfx3P48381 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Rfx3P48381 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC9.86□□□□□ -0.83
Rfx3P48381 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Rfx3P48381 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Rfx3P48381 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Rfx3P48381 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Rfx3P48381 AA474408-201ENSMUST00000098110 3339 ntBASIC9.86□□□□□ -0.83
Rfx3P48381 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Rfx3P48381 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Rfx3P48381 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Rfx3P48381 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC9.86□□□□□ -0.83
Rfx3P48381 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Rfx3P48381 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Rfx3P48381 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC9.86□□□□□ -0.83
Rfx3P48381 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Rfx3P48381 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Rfx3P48381 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Rfx3P48381 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Rfx3P48381 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Rfx3P48381 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC9.86□□□□□ -0.83
Rfx3P48381 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Rfx3P48381 Gm12419-201ENSMUST00000116649 636 ntBASIC9.86□□□□□ -0.83
Rfx3P48381 Gm13045-201ENSMUST00000119019 712 ntBASIC9.86□□□□□ -0.83
Rfx3P48381 Gm4726-201ENSMUST00000135604 736 ntBASIC9.86□□□□□ -0.83
Rfx3P48381 Gm6019-201ENSMUST00000148369 736 ntBASIC9.86□□□□□ -0.83
Rfx3P48381 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC9.86□□□□□ -0.83
Rfx3P48381 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Rfx3P48381 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC9.86□□□□□ -0.83
Rfx3P48381 Gm42588-201ENSMUST00000200538 1297 ntBASIC9.86□□□□□ -0.83
Rfx3P48381 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC9.86□□□□□ -0.83
Rfx3P48381 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Rfx3P48381 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Rfx3P48381 AC122350.1-201ENSMUST00000228135 533 ntBASIC9.86□□□□□ -0.83
Rfx3P48381 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Rfx3P48381 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Rfx3P48381 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Rfx3P48381 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Rfx3P48381 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Rfx3P48381 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Rfx3P48381 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Rfx3P48381 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC9.86□□□□□ -0.83
Rfx3P48381 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
Rfx3P48381 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms