Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sox18P43680 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC10.86□□□□□ -0.67
Sox18P43680 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox18P43680 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Sox18P43680 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox18P43680 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox18P43680 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.85□□□□□ -0.67
Sox18P43680 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Sox18P43680 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.85□□□□□ -0.67
Sox18P43680 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Sox18P43680 Gm44562-201ENSMUST00000207194 1347 ntBASIC10.85□□□□□ -0.67
Sox18P43680 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox18P43680 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox18P43680 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox18P43680 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.85□□□□□ -0.67
Sox18P43680 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox18P43680 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Sox18P43680 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox18P43680 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Sox18P43680 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox18P43680 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox18P43680 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox18P43680 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox18P43680 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox18P43680 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Sox18P43680 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.85□□□□□ -0.67
Sox18P43680 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox18P43680 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox18P43680 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox18P43680 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox18P43680 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Sox18P43680 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC10.85□□□□□ -0.67
Sox18P43680 Gm15549-201ENSMUST00000121595 622 ntBASIC10.85□□□□□ -0.67
Sox18P43680 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox18P43680 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox18P43680 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox18P43680 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC10.85□□□□□ -0.67
Sox18P43680 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox18P43680 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox18P43680 Gm26706-201ENSMUST00000180718 746 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox18P43680 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC10.85□□□□□ -0.67
Sox18P43680 Asb4-202ENSMUST00000183358 1143 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox18P43680 Mir7035-201ENSMUST00000184713 82 ntBASIC10.85□□□□□ -0.67
Sox18P43680 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.85□□□□□ -0.67
Sox18P43680 Gm5066-201ENSMUST00000188479 822 ntBASIC10.85□□□□□ -0.67
Sox18P43680 Gm37207-201ENSMUST00000194284 296 ntBASIC10.85□□□□□ -0.67
Sox18P43680 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Sox18P43680 Gm43506-201ENSMUST00000200675 753 ntBASIC10.85□□□□□ -0.67
Sox18P43680 Gm45078-201ENSMUST00000205343 546 ntBASIC10.85□□□□□ -0.67
Sox18P43680 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.85□□□□□ -0.67
Sox18P43680 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox18P43680 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox18P43680 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Sox18P43680 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Sox18P43680 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Sox18P43680 Rps3a2-201ENSMUST00000074245 792 ntBASIC10.85□□□□□ -0.67
Sox18P43680 Rps3a3-201ENSMUST00000074680 795 ntBASIC10.85□□□□□ -0.67
Sox18P43680 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox18P43680 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox18P43680 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Sox18P43680 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox18P43680 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox18P43680 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.85□□□□□ -0.67
Sox18P43680 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox18P43680 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox18P43680 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox18P43680 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox18P43680 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.85□□□□□ -0.67
Sox18P43680 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox18P43680 Gm44241-201ENSMUST00000203230 1662 ntBASIC10.85□□□□□ -0.67
Sox18P43680 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox18P43680 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox18P43680 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.85□□□□□ -0.67
Sox18P43680 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox18P43680 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox18P43680 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox18P43680 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox18P43680 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sox18P43680 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Sox18P43680 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox18P43680 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Sox18P43680 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox18P43680 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox18P43680 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Sox18P43680 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Sox18P43680 Gm23604-201ENSMUST00000104311 132 ntBASIC10.84□□□□□ -0.67
Sox18P43680 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox18P43680 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC10.84□□□□□ -0.67
Sox18P43680 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC10.84□□□□□ -0.67
Sox18P43680 Gm12885-201ENSMUST00000122246 328 ntBASIC10.84□□□□□ -0.67
Sox18P43680 Gm14617-201ENSMUST00000128053 798 ntTSL 5 BASIC10.84□□□□□ -0.67
Sox18P43680 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sox18P43680 Gm9192-201ENSMUST00000183221 985 ntBASIC10.84□□□□□ -0.67
Sox18P43680 Mir7051-201ENSMUST00000184167 73 ntBASIC10.84□□□□□ -0.67
Sox18P43680 Tac1-205ENSMUST00000185187 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox18P43680 Gm28917-201ENSMUST00000187294 237 ntBASIC10.84□□□□□ -0.67
Sox18P43680 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC10.84□□□□□ -0.67
Sox18P43680 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC10.84□□□□□ -0.67
Sox18P43680 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC10.84□□□□□ -0.67
Sox18P43680 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms