Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx1-2P42580 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx1-2P42580 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx1-2P42580 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx1-2P42580 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx1-2P42580 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx1-2P42580 Tpm3-204ENSMUST00000119570 2233 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx1-2P42580 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx1-2P42580 Ogdh-204ENSMUST00000101554 4106 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx1-2P42580 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Nkx1-2P42580 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx1-2P42580 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Nkx1-2P42580 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx1-2P42580 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Nkx1-2P42580 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Nkx1-2P42580 Fgf14-201ENSMUST00000026631 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx1-2P42580 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx1-2P42580 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx1-2P42580 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx1-2P42580 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx1-2P42580 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC13.37□□□□□ -0.27
Nkx1-2P42580 Zscan21-203ENSMUST00000110959 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx1-2P42580 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx1-2P42580 Gm6170-201ENSMUST00000187672 1388 ntBASIC13.37□□□□□ -0.27
Nkx1-2P42580 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx1-2P42580 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC13.37□□□□□ -0.27
Nkx1-2P42580 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC13.37□□□□□ -0.27
Nkx1-2P42580 Gm15432-201ENSMUST00000121106 195 ntBASIC13.37□□□□□ -0.27
Nkx1-2P42580 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC13.37□□□□□ -0.27
Nkx1-2P42580 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx1-2P42580 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Nkx1-2P42580 Gm42859-201ENSMUST00000199572 193 ntBASIC13.37□□□□□ -0.27
Nkx1-2P42580 Gm5599-201ENSMUST00000209602 788 ntBASIC13.37□□□□□ -0.27
Nkx1-2P42580 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC13.37□□□□□ -0.27
Nkx1-2P42580 AC129219.2-201ENSMUST00000224324 701 ntBASIC13.37□□□□□ -0.27
Nkx1-2P42580 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.37□□□□□ -0.27
Nkx1-2P42580 Gm10020-201ENSMUST00000081993 612 ntBASIC13.37□□□□□ -0.27
Nkx1-2P42580 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx1-2P42580 4631405J19Rik-202ENSMUST00000111270 2909 ntTSL 2 BASIC13.37□□□□□ -0.27
Nkx1-2P42580 Il18bp-202ENSMUST00000209368 2596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx1-2P42580 4933413C19Rik-201ENSMUST00000162380 2217 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx1-2P42580 Gm21874-202ENSMUST00000190315 1538 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Nkx1-2P42580 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC13.37□□□□□ -0.27
Nkx1-2P42580 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx1-2P42580 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx1-2P42580 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx1-2P42580 Gramd1b-202ENSMUST00000118159 2781 ntTSL 5 BASIC13.37□□□□□ -0.27
Nkx1-2P42580 Oprm1-216ENSMUST00000105611 2420 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx1-2P42580 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC13.36□□□□□ -0.27
Nkx1-2P42580 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx1-2P42580 Mgme1-201ENSMUST00000028910 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx1-2P42580 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Nkx1-2P42580 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx1-2P42580 Gm5766-201ENSMUST00000160520 1977 ntBASIC13.36□□□□□ -0.27
Nkx1-2P42580 Ik-201ENSMUST00000007042 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx1-2P42580 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx1-2P42580 Slc28a1-202ENSMUST00000119083 2899 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Nkx1-2P42580 Gm26668-201ENSMUST00000181125 3635 ntTSL 5 BASIC13.36□□□□□ -0.27
Nkx1-2P42580 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx1-2P42580 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx1-2P42580 Wnt5a-202ENSMUST00000112272 3650 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx1-2P42580 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx1-2P42580 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Nkx1-2P42580 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC13.36□□□□□ -0.27
Nkx1-2P42580 Gm14942-201ENSMUST00000119642 336 ntBASIC13.36□□□□□ -0.27
Nkx1-2P42580 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC13.36□□□□□ -0.27
Nkx1-2P42580 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx1-2P42580 Gm4917-201ENSMUST00000121452 650 ntBASIC13.36□□□□□ -0.27
Nkx1-2P42580 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.36□□□□□ -0.27
Nkx1-2P42580 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC13.36□□□□□ -0.27
Nkx1-2P42580 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC13.36□□□□□ -0.27
Nkx1-2P42580 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC13.36□□□□□ -0.27
Nkx1-2P42580 Mt1-202ENSMUST00000211807 1085 ntBASIC13.36□□□□□ -0.27
Nkx1-2P42580 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.36□□□□□ -0.27
Nkx1-2P42580 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx1-2P42580 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Nkx1-2P42580 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.36□□□□□ -0.27
Nkx1-2P42580 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC13.36□□□□□ -0.27
Nkx1-2P42580 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx1-2P42580 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC13.36□□□□□ -0.27
Nkx1-2P42580 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx1-2P42580 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx1-2P42580 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx1-2P42580 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx1-2P42580 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx1-2P42580 Zfp7-201ENSMUST00000023179 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx1-2P42580 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx1-2P42580 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Nkx1-2P42580 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx1-2P42580 Gm6768-201ENSMUST00000022467 1878 ntBASIC13.36□□□□□ -0.27
Nkx1-2P42580 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx1-2P42580 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx1-2P42580 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx1-2P42580 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx1-2P42580 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx1-2P42580 Gm42571-201ENSMUST00000201197 2464 ntBASIC13.35□□□□□ -0.27
Nkx1-2P42580 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx1-2P42580 Sqor-202ENSMUST00000110506 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx1-2P42580 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx1-2P42580 Gm20426-201ENSMUST00000173657 440 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms