Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Cd28P31041 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Cd28P31041 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd28P31041 Gm12218-201ENSMUST00000117666 399 ntBASIC9.55□□□□□ -0.88
Cd28P31041 Gm12570-201ENSMUST00000122047 1030 ntBASIC9.55□□□□□ -0.88
Cd28P31041 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cd28P31041 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC9.55□□□□□ -0.88
Cd28P31041 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cd28P31041 Gm25881-201ENSMUST00000157783 103 ntBASIC9.55□□□□□ -0.88
Cd28P31041 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC9.55□□□□□ -0.88
Cd28P31041 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC9.55□□□□□ -0.88
Cd28P31041 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Cd28P31041 Gm12407-201ENSMUST00000180219 324 ntBASIC9.55□□□□□ -0.88
Cd28P31041 Mir8109-201ENSMUST00000184375 117 ntBASIC9.55□□□□□ -0.88
Cd28P31041 Gm29499-201ENSMUST00000189151 486 ntBASIC9.55□□□□□ -0.88
Cd28P31041 Gm28329-201ENSMUST00000191208 689 ntBASIC9.55□□□□□ -0.88
Cd28P31041 Gm29171-201ENSMUST00000191397 486 ntBASIC9.55□□□□□ -0.88
Cd28P31041 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC9.55□□□□□ -0.88
Cd28P31041 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC9.55□□□□□ -0.88
Cd28P31041 Gm9111-201ENSMUST00000219394 709 ntBASIC9.55□□□□□ -0.88
Cd28P31041 CT025602.2-201ENSMUST00000226553 772 ntBASIC9.55□□□□□ -0.88
Cd28P31041 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd28P31041 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Cd28P31041 Dglucy-201ENSMUST00000069782 3295 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd28P31041 Adgrd1-201ENSMUST00000056617 5163 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd28P31041 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Cd28P31041 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cd28P31041 Dusp16-202ENSMUST00000129433 3993 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd28P31041 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd28P31041 Parp1-201ENSMUST00000027777 3873 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd28P31041 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cd28P31041 Cul2-206ENSMUST00000162301 3828 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd28P31041 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd28P31041 Tktl2-202ENSMUST00000183187 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd28P31041 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd28P31041 Gm5159-201ENSMUST00000212733 1652 ntBASIC9.55□□□□□ -0.88
Cd28P31041 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd28P31041 Gm40377-201ENSMUST00000204604 2015 ntBASIC9.55□□□□□ -0.88
Cd28P31041 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Cd28P31041 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC9.54□□□□□ -0.88
Cd28P31041 Clic5-201ENSMUST00000024755 5870 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cd28P31041 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC9.54□□□□□ -0.88
Cd28P31041 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cd28P31041 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cd28P31041 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cd28P31041 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cd28P31041 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cd28P31041 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cd28P31041 Dync1h1-201ENSMUST00000018851 14342 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cd28P31041 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC9.54□□□□□ -0.88
Cd28P31041 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cd28P31041 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC9.54□□□□□ -0.88
Cd28P31041 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC9.54□□□□□ -0.88
Cd28P31041 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cd28P31041 Smarcc2-203ENSMUST00000105235 4032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cd28P31041 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC9.54□□□□□ -0.88
Cd28P31041 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC9.54□□□□□ -0.88
Cd28P31041 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cd28P31041 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cd28P31041 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC9.54□□□□□ -0.88
Cd28P31041 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC9.54□□□□□ -0.88
Cd28P31041 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC9.54□□□□□ -0.88
Cd28P31041 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cd28P31041 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cd28P31041 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Cd28P31041 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC9.54□□□□□ -0.88
Cd28P31041 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cd28P31041 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC9.54□□□□□ -0.88
Cd28P31041 AC134860.1-201ENSMUST00000224867 660 ntBASIC9.54□□□□□ -0.88
Cd28P31041 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Cd28P31041 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Cd28P31041 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC9.54□□□□□ -0.88
Cd28P31041 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cd28P31041 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cd28P31041 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cd28P31041 Tsc1-204ENSMUST00000113870 7595 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cd28P31041 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Cd28P31041 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cd28P31041 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cd28P31041 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cd28P31041 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cd28P31041 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cd28P31041 Aplp2-201ENSMUST00000072634 3634 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cd28P31041 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cd28P31041 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC9.53□□□□□ -0.88
Cd28P31041 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cd28P31041 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cd28P31041 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC9.53□□□□□ -0.88
Cd28P31041 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cd28P31041 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cd28P31041 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Cd28P31041 Gm7967-202ENSMUST00000191042 5042 ntBASIC9.53□□□□□ -0.88
Cd28P31041 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cd28P31041 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cd28P31041 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC9.53□□□□□ -0.88
Cd28P31041 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cd28P31041 Cyp4x1-202ENSMUST00000106545 4187 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cd28P31041 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cd28P31041 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cd28P31041 Gm13461-201ENSMUST00000120980 662 ntBASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms