Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm5035-201ENSMUST00000215581 927 ntBASIC9.97□□□□□ -0.81
Nedd8P29595 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC9.97□□□□□ -0.81
Nedd8P29595 AC113082.1-201ENSMUST00000217324 327 ntBASIC9.97□□□□□ -0.81
Nedd8P29595 Gm18165-201ENSMUST00000217426 928 ntBASIC9.97□□□□□ -0.81
Nedd8P29595 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC9.97□□□□□ -0.81
Nedd8P29595 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nedd8P29595 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nedd8P29595 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nedd8P29595 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nedd8P29595 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC9.97□□□□□ -0.81
Nedd8P29595 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nedd8P29595 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Nedd8P29595 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nedd8P29595 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Nedd8P29595 Prkcd-208ENSMUST00000112211 2851 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Nedd8P29595 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nedd8P29595 Brca2-210ENSMUST00000202313 10517 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nedd8P29595 Miga2-202ENSMUST00000100214 3586 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nedd8P29595 Cd1d1-201ENSMUST00000029717 1946 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nedd8P29595 Rac2-201ENSMUST00000043214 3036 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nedd8P29595 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nedd8P29595 Ptpn7-201ENSMUST00000049449 3261 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nedd8P29595 Sardh-202ENSMUST00000102886 4521 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nedd8P29595 Adamts13-202ENSMUST00000102891 4506 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nedd8P29595 Zfp60-208ENSMUST00000167955 2115 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Nedd8P29595 Gsdmc3-203ENSMUST00000190682 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nedd8P29595 Gm29222-201ENSMUST00000185442 2167 ntTSL 5 BASIC9.97□□□□□ -0.81
Nedd8P29595 Gm29449-201ENSMUST00000187820 2168 ntTSL 5 BASIC9.97□□□□□ -0.81
Nedd8P29595 Gm28104-201ENSMUST00000188331 2168 ntTSL 5 BASIC9.97□□□□□ -0.81
Nedd8P29595 Gm28743-201ENSMUST00000189014 2168 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Nedd8P29595 Gm29384-201ENSMUST00000190852 2168 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Nedd8P29595 Gm37538-201ENSMUST00000192417 2168 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Nedd8P29595 Tmem63c-203ENSMUST00000146292 3455 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nedd8P29595 Sppl2c-202ENSMUST00000107000 2225 ntAPPRIS P4 BASIC9.97□□□□□ -0.81
Nedd8P29595 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nedd8P29595 Hemgn-201ENSMUST00000071096 2321 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Nedd8P29595 Ubap2-201ENSMUST00000030143 4368 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Nedd8P29595 Itsn1-204ENSMUST00000113993 3787 ntTSL 5 BASIC9.96□□□□□ -0.81
Nedd8P29595 Etnppl-203ENSMUST00000166187 1712 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Nedd8P29595 Smyd1-202ENSMUST00000114186 3292 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Nedd8P29595 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Nedd8P29595 Gm4784-201ENSMUST00000117365 1824 ntBASIC9.96□□□□□ -0.81
Nedd8P29595 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nedd8P29595 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC9.96□□□□□ -0.82
Nedd8P29595 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC9.96□□□□□ -0.82
Nedd8P29595 Gm14592-201ENSMUST00000117201 560 ntBASIC9.96□□□□□ -0.82
Nedd8P29595 Gm11478-201ENSMUST00000117851 599 ntBASIC9.96□□□□□ -0.82
Nedd8P29595 Gm15207-201ENSMUST00000119259 442 ntBASIC9.96□□□□□ -0.82
Nedd8P29595 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC9.96□□□□□ -0.82
Nedd8P29595 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC9.96□□□□□ -0.82
Nedd8P29595 Gm6963-201ENSMUST00000147879 379 ntBASIC9.96□□□□□ -0.82
Nedd8P29595 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC9.96□□□□□ -0.82
Nedd8P29595 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC9.96□□□□□ -0.82
Nedd8P29595 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC9.96□□□□□ -0.82
Nedd8P29595 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC9.96□□□□□ -0.82
Nedd8P29595 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC9.96□□□□□ -0.82
Nedd8P29595 Gm44420-201ENSMUST00000203669 490 ntBASIC9.96□□□□□ -0.82
Nedd8P29595 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC9.96□□□□□ -0.82
Nedd8P29595 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Nedd8P29595 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Nedd8P29595 Pkp1-203ENSMUST00000163260 3023 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nedd8P29595 Pi4ka-211ENSMUST00000154364 6630 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nedd8P29595 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Nedd8P29595 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Nedd8P29595 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Nedd8P29595 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nedd8P29595 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Nedd8P29595 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nedd8P29595 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nedd8P29595 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nedd8P29595 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nedd8P29595 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Nedd8P29595 Gm43636-201ENSMUST00000201501 2235 ntBASIC9.96□□□□□ -0.82
Nedd8P29595 Gm30132-201ENSMUST00000212816 8757 ntTSL 5 BASIC9.96□□□□□ -0.82
Nedd8P29595 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nedd8P29595 Gm21142-201ENSMUST00000179999 2604 ntBASIC9.96□□□□□ -0.82
Nedd8P29595 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Nedd8P29595 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC9.96□□□□□ -0.82
Nedd8P29595 Gm44926-201ENSMUST00000207898 1826 ntBASIC9.96□□□□□ -0.82
Nedd8P29595 Adgrl3-204ENSMUST00000117407 5705 ntTSL 5 BASIC9.96□□□□□ -0.82
Nedd8P29595 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Nedd8P29595 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Nedd8P29595 Gm10857-201ENSMUST00000195343 2794 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Nedd8P29595 Rassf5-202ENSMUST00000068564 3076 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Nedd8P29595 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Nedd8P29595 Gm37084-201ENSMUST00000191688 5898 ntBASIC9.95□□□□□ -0.82
Nedd8P29595 Stk26-201ENSMUST00000033444 3639 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nedd8P29595 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Nedd8P29595 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
Nedd8P29595 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Nedd8P29595 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Nedd8P29595 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nedd8P29595 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC9.95□□□□□ -0.82
Nedd8P29595 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Nedd8P29595 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Nedd8P29595 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
Nedd8P29595 Gm38230-201ENSMUST00000193572 1159 ntBASIC9.95□□□□□ -0.82
Nedd8P29595 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Nedd8P29595 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC9.95□□□□□ -0.82
Nedd8P29595 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms