Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vcam1P29533 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vcam1P29533 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vcam1P29533 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Vcam1P29533 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Vcam1P29533 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vcam1P29533 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vcam1P29533 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Vcam1P29533 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Vcam1P29533 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Vcam1P29533 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vcam1P29533 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Vcam1P29533 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vcam1P29533 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vcam1P29533 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Vcam1P29533 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Vcam1P29533 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vcam1P29533 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Vcam1P29533 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vcam1P29533 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vcam1P29533 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Vcam1P29533 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vcam1P29533 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vcam1P29533 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Vcam1P29533 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Vcam1P29533 Mir291b-201ENSMUST00000104838 79 ntBASIC12.52□□□□□ -0.41
Vcam1P29533 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Vcam1P29533 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC12.52□□□□□ -0.41
Vcam1P29533 Gm12570-201ENSMUST00000122047 1030 ntBASIC12.52□□□□□ -0.41
Vcam1P29533 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC12.52□□□□□ -0.41
Vcam1P29533 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vcam1P29533 Mir1941-201ENSMUST00000157834 83 ntBASIC12.52□□□□□ -0.41
Vcam1P29533 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vcam1P29533 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Vcam1P29533 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Vcam1P29533 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Vcam1P29533 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC12.52□□□□□ -0.41
Vcam1P29533 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Vcam1P29533 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vcam1P29533 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Vcam1P29533 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Vcam1P29533 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vcam1P29533 Gm8873-201ENSMUST00000217847 1439 ntBASIC12.52□□□□□ -0.41
Vcam1P29533 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Vcam1P29533 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vcam1P29533 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vcam1P29533 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vcam1P29533 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vcam1P29533 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Vcam1P29533 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vcam1P29533 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vcam1P29533 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vcam1P29533 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vcam1P29533 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vcam1P29533 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Vcam1P29533 Gm3372-201ENSMUST00000198806 1792 ntBASIC12.51□□□□□ -0.41
Vcam1P29533 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Vcam1P29533 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Vcam1P29533 Gm42971-201ENSMUST00000199228 2079 ntBASIC12.51□□□□□ -0.41
Vcam1P29533 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Vcam1P29533 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Vcam1P29533 Gm5510-201ENSMUST00000117826 486 ntBASIC12.51□□□□□ -0.41
Vcam1P29533 Gng5-ps-201ENSMUST00000120931 205 ntBASIC12.51□□□□□ -0.41
Vcam1P29533 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vcam1P29533 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC12.51□□□□□ -0.41
Vcam1P29533 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vcam1P29533 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vcam1P29533 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC12.51□□□□□ -0.41
Vcam1P29533 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vcam1P29533 Gm6686-201ENSMUST00000178455 258 ntBASIC12.51□□□□□ -0.41
Vcam1P29533 Gm7539-201ENSMUST00000189789 630 ntBASIC12.51□□□□□ -0.41
Vcam1P29533 Gm6518-201ENSMUST00000208450 342 ntBASIC12.51□□□□□ -0.41
Vcam1P29533 Gm18466-201ENSMUST00000209147 499 ntBASIC12.51□□□□□ -0.41
Vcam1P29533 AC154759.1-201ENSMUST00000224137 1159 ntBASIC12.51□□□□□ -0.41
Vcam1P29533 CT010505.2-201ENSMUST00000227918 998 ntBASIC12.51□□□□□ -0.41
Vcam1P29533 AC154213.1-201ENSMUST00000228234 583 ntBASIC12.51□□□□□ -0.41
Vcam1P29533 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vcam1P29533 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vcam1P29533 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Vcam1P29533 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vcam1P29533 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vcam1P29533 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Vcam1P29533 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vcam1P29533 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.51□□□□□ -0.41
Vcam1P29533 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vcam1P29533 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vcam1P29533 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vcam1P29533 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vcam1P29533 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vcam1P29533 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vcam1P29533 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Vcam1P29533 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.51□□□□□ -0.41
Vcam1P29533 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vcam1P29533 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vcam1P29533 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Vcam1P29533 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Vcam1P29533 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vcam1P29533 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vcam1P29533 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vcam1P29533 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms