Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Mir194-2-201ENSMUST00000083648 86 ntBASIC14.09□□□□□ -0.15
Hoxc9P09633 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc9P09633 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc9P09633 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Hoxc9P09633 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Hoxc9P09633 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc9P09633 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC14.09□□□□□ -0.15
Hoxc9P09633 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc9P09633 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc9P09633 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC14.09□□□□□ -0.15
Hoxc9P09633 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc9P09633 Gm17230-201ENSMUST00000171194 3942 ntBASIC14.09□□□□□ -0.15
Hoxc9P09633 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Hoxc9P09633 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Hoxc9P09633 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Hoxc9P09633 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hoxc9P09633 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Hoxc9P09633 Gm38034-201ENSMUST00000193915 2069 ntBASIC14.08□□□□□ -0.15
Hoxc9P09633 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC14.08□□□□□ -0.15
Hoxc9P09633 Gm13608-201ENSMUST00000121807 1406 ntBASIC14.08□□□□□ -0.15
Hoxc9P09633 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hoxc9P09633 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
Hoxc9P09633 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Hoxc9P09633 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc9P09633 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.08□□□□□ -0.16
Hoxc9P09633 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc9P09633 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc9P09633 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc9P09633 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc9P09633 Gm11235-201ENSMUST00000117763 333 ntBASIC14.08□□□□□ -0.16
Hoxc9P09633 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc9P09633 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC14.08□□□□□ -0.16
Hoxc9P09633 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc9P09633 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc9P09633 Gm20091-201ENSMUST00000179683 189 ntBASIC14.08□□□□□ -0.16
Hoxc9P09633 Gm6644-201ENSMUST00000186507 951 ntBASIC14.08□□□□□ -0.16
Hoxc9P09633 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc9P09633 Gm37944-201ENSMUST00000194233 414 ntBASIC14.08□□□□□ -0.16
Hoxc9P09633 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc9P09633 Gm5865-201ENSMUST00000198713 637 ntBASIC14.08□□□□□ -0.16
Hoxc9P09633 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC14.08□□□□□ -0.16
Hoxc9P09633 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc9P09633 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc9P09633 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc9P09633 Gm5424-201ENSMUST00000053865 1240 ntBASIC14.08□□□□□ -0.16
Hoxc9P09633 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Hoxc9P09633 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Hoxc9P09633 Gm38111-201ENSMUST00000194817 2741 ntBASIC14.08□□□□□ -0.16
Hoxc9P09633 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Hoxc9P09633 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc9P09633 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc9P09633 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Hoxc9P09633 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc9P09633 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC14.08□□□□□ -0.16
Hoxc9P09633 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc9P09633 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc9P09633 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Hoxc9P09633 AC124561.1-202ENSMUST00000228652 1929 ntBASIC14.07□□□□□ -0.16
Hoxc9P09633 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc9P09633 Gm10537-201ENSMUST00000192625 1698 ntBASIC14.07□□□□□ -0.16
Hoxc9P09633 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc9P09633 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Hoxc9P09633 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc9P09633 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc9P09633 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc9P09633 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc9P09633 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc9P09633 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC14.07□□□□□ -0.16
Hoxc9P09633 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC14.07□□□□□ -0.16
Hoxc9P09633 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Hoxc9P09633 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc9P09633 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC14.07□□□□□ -0.16
Hoxc9P09633 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc9P09633 Gm13426-201ENSMUST00000117887 795 ntBASIC14.07□□□□□ -0.16
Hoxc9P09633 Gm11736-201ENSMUST00000121468 505 ntBASIC14.07□□□□□ -0.16
Hoxc9P09633 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC14.07□□□□□ -0.16
Hoxc9P09633 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc9P09633 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc9P09633 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Hoxc9P09633 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc9P09633 Gm5543-201ENSMUST00000193329 1091 ntBASIC14.07□□□□□ -0.16
Hoxc9P09633 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC14.07□□□□□ -0.16
Hoxc9P09633 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC14.07□□□□□ -0.16
Hoxc9P09633 Gm5040-201ENSMUST00000218609 800 ntBASIC14.07□□□□□ -0.16
Hoxc9P09633 Gm29689-201ENSMUST00000221076 589 ntBASIC14.07□□□□□ -0.16
Hoxc9P09633 AC187103.3-201ENSMUST00000225725 646 ntBASIC14.07□□□□□ -0.16
Hoxc9P09633 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC14.07□□□□□ -0.16
Hoxc9P09633 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc9P09633 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc9P09633 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc9P09633 Gm21136-201ENSMUST00000186812 2575 ntBASIC14.07□□□□□ -0.16
Hoxc9P09633 Gm6605-201ENSMUST00000031488 2574 ntBASIC14.07□□□□□ -0.16
Hoxc9P09633 AC160410.1-201ENSMUST00000219298 1972 ntBASIC14.07□□□□□ -0.16
Hoxc9P09633 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc9P09633 Gm29358-202ENSMUST00000187941 3227 ntBASIC14.07□□□□□ -0.16
Hoxc9P09633 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc9P09633 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc9P09633 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc9P09633 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Hoxc9P09633 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms