Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hoxd3P09027 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC8.86□□□□□ -0.99
Hoxd3P09027 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC8.86□□□□□ -0.99
Hoxd3P09027 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
Hoxd3P09027 Gm14906-201ENSMUST00000119265 390 ntBASIC8.86□□□□□ -0.99
Hoxd3P09027 Gm11278-201ENSMUST00000121002 997 ntBASIC8.86□□□□□ -0.99
Hoxd3P09027 Gm13182-201ENSMUST00000122241 312 ntBASIC8.86□□□□□ -0.99
Hoxd3P09027 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC8.86□□□□□ -0.99
Hoxd3P09027 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Hoxd3P09027 Gm20495-201ENSMUST00000173902 235 ntBASIC8.86□□□□□ -0.99
Hoxd3P09027 Gm24809-201ENSMUST00000175318 271 ntBASIC8.86□□□□□ -0.99
Hoxd3P09027 Gm27025-201ENSMUST00000182392 942 ntBASIC8.86□□□□□ -0.99
Hoxd3P09027 Gm9358-201ENSMUST00000183067 927 ntBASIC8.86□□□□□ -0.99
Hoxd3P09027 Gm27861-201ENSMUST00000183920 214 ntBASIC8.86□□□□□ -0.99
Hoxd3P09027 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hoxd3P09027 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC8.86□□□□□ -0.99
Hoxd3P09027 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hoxd3P09027 Gm29617-203ENSMUST00000186558 1033 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Hoxd3P09027 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC8.86□□□□□ -0.99
Hoxd3P09027 Gm44329-201ENSMUST00000197469 112 ntBASIC8.86□□□□□ -0.99
Hoxd3P09027 Gm43815-201ENSMUST00000197676 990 ntBASIC8.86□□□□□ -0.99
Hoxd3P09027 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC8.86□□□□□ -0.99
Hoxd3P09027 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC8.86□□□□□ -0.99
Hoxd3P09027 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Hoxd3P09027 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC8.86□□□□□ -0.99
Hoxd3P09027 CT030170.2-201ENSMUST00000223267 126 ntBASIC8.86□□□□□ -0.99
Hoxd3P09027 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hoxd3P09027 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hoxd3P09027 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
Hoxd3P09027 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Hoxd3P09027 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hoxd3P09027 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Hoxd3P09027 Gm10145-201ENSMUST00000077776 462 ntBASIC8.86□□□□□ -0.99
Hoxd3P09027 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Hoxd3P09027 Gm10705-201ENSMUST00000098980 461 ntBASIC8.86□□□□□ -0.99
Hoxd3P09027 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Hoxd3P09027 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Hoxd3P09027 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hoxd3P09027 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hoxd3P09027 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hoxd3P09027 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC8.86□□□□□ -0.99
Hoxd3P09027 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hoxd3P09027 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
Hoxd3P09027 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Hoxd3P09027 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Hoxd3P09027 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hoxd3P09027 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hoxd3P09027 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hoxd3P09027 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hoxd3P09027 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hoxd3P09027 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Hoxd3P09027 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC8.86□□□□□ -0.99
Hoxd3P09027 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hoxd3P09027 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hoxd3P09027 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hoxd3P09027 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Hoxd3P09027 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hoxd3P09027 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Hoxd3P09027 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hoxd3P09027 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hoxd3P09027 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hoxd3P09027 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hoxd3P09027 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Hoxd3P09027 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hoxd3P09027 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hoxd3P09027 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hoxd3P09027 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hoxd3P09027 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Hoxd3P09027 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hoxd3P09027 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC8.85□□□□□ -0.99
Hoxd3P09027 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hoxd3P09027 Gm37600-201ENSMUST00000193764 3292 ntBASIC8.85□□□□□ -0.99
Hoxd3P09027 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC8.85□□□□□ -0.99
Hoxd3P09027 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Hoxd3P09027 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hoxd3P09027 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC8.85□□□□□ -0.99
Hoxd3P09027 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hoxd3P09027 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hoxd3P09027 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hoxd3P09027 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC8.85□□□□□ -0.99
Hoxd3P09027 Gm43760-201ENSMUST00000202120 3015 ntBASIC8.85□□□□□ -0.99
Hoxd3P09027 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Hoxd3P09027 Gm44086-201ENSMUST00000203251 2349 ntBASIC8.85□□□□□ -0.99
Hoxd3P09027 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hoxd3P09027 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Hoxd3P09027 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC8.85□□□□□ -0.99
Hoxd3P09027 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hoxd3P09027 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Hoxd3P09027 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Hoxd3P09027 Gm26013-201ENSMUST00000104404 119 ntBASIC8.85□□□□□ -0.99
Hoxd3P09027 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Hoxd3P09027 Gm15018-201ENSMUST00000117090 633 ntBASIC8.85□□□□□ -0.99
Hoxd3P09027 Gm12856-201ENSMUST00000119471 1293 ntBASIC8.85□□□□□ -0.99
Hoxd3P09027 Gm13506-201ENSMUST00000120391 1083 ntBASIC8.85□□□□□ -0.99
Hoxd3P09027 Gm15329-201ENSMUST00000121408 155 ntBASIC8.85□□□□□ -0.99
Hoxd3P09027 Gm15549-201ENSMUST00000121595 622 ntBASIC8.85□□□□□ -0.99
Hoxd3P09027 Gm14713-201ENSMUST00000122362 686 ntBASIC8.85□□□□□ -0.99
Hoxd3P09027 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC8.85□□□□□ -0.99
Hoxd3P09027 Gm16571-201ENSMUST00000159112 291 ntBASIC8.85□□□□□ -0.99
Hoxd3P09027 Gm18159-201ENSMUST00000174516 1070 ntBASIC8.85□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms