Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxa3P02831 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxa3P02831 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC9.2□□□□□ -0.94
Hoxa3P02831 Gm28833-201ENSMUST00000189671 559 ntBASIC9.2□□□□□ -0.94
Hoxa3P02831 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC9.2□□□□□ -0.94
Hoxa3P02831 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC9.2□□□□□ -0.94
Hoxa3P02831 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxa3P02831 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC9.2□□□□□ -0.94
Hoxa3P02831 AC122024.3-201ENSMUST00000217719 294 ntBASIC9.2□□□□□ -0.94
Hoxa3P02831 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC9.2□□□□□ -0.94
Hoxa3P02831 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC9.2□□□□□ -0.94
Hoxa3P02831 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxa3P02831 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
Hoxa3P02831 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC9.2□□□□□ -0.94
Hoxa3P02831 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxa3P02831 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxa3P02831 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxa3P02831 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Hoxa3P02831 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxa3P02831 Gm5308-201ENSMUST00000196752 1354 ntBASIC9.2□□□□□ -0.94
Hoxa3P02831 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxa3P02831 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Hoxa3P02831 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxa3P02831 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxa3P02831 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxa3P02831 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxa3P02831 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Hoxa3P02831 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxa3P02831 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxa3P02831 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxa3P02831 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxa3P02831 Gm37368-201ENSMUST00000193173 3212 ntBASIC9.2□□□□□ -0.94
Hoxa3P02831 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC9.2□□□□□ -0.94
Hoxa3P02831 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Hoxa3P02831 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxa3P02831 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxa3P02831 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxa3P02831 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Hoxa3P02831 Gm14005-209ENSMUST00000224993 1832 ntBASIC9.19□□□□□ -0.94
Hoxa3P02831 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxa3P02831 Gm43127-201ENSMUST00000195890 2789 ntBASIC9.19□□□□□ -0.94
Hoxa3P02831 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC9.19□□□□□ -0.94
Hoxa3P02831 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxa3P02831 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxa3P02831 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC9.19□□□□□ -0.94
Hoxa3P02831 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxa3P02831 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC9.19□□□□□ -0.94
Hoxa3P02831 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC9.19□□□□□ -0.94
Hoxa3P02831 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxa3P02831 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxa3P02831 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxa3P02831 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxa3P02831 Gm11560-201ENSMUST00000117567 948 ntBASIC9.19□□□□□ -0.94
Hoxa3P02831 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxa3P02831 Gm13022-201ENSMUST00000121181 285 ntBASIC9.19□□□□□ -0.94
Hoxa3P02831 Gm3828-201ENSMUST00000121817 257 ntBASIC9.19□□□□□ -0.94
Hoxa3P02831 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxa3P02831 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxa3P02831 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Hoxa3P02831 Gm43912-201ENSMUST00000204352 538 ntBASIC9.19□□□□□ -0.94
Hoxa3P02831 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC9.19□□□□□ -0.94
Hoxa3P02831 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Hoxa3P02831 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxa3P02831 Gm25580-201ENSMUST00000083409 327 ntBASIC9.19□□□□□ -0.94
Hoxa3P02831 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxa3P02831 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxa3P02831 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Hoxa3P02831 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxa3P02831 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
Hoxa3P02831 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxa3P02831 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxa3P02831 Gm15784-201ENSMUST00000120260 1462 ntBASIC9.19□□□□□ -0.94
Hoxa3P02831 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC9.19□□□□□ -0.94
Hoxa3P02831 Gm10829-201ENSMUST00000202084 2988 ntBASIC9.19□□□□□ -0.94
Hoxa3P02831 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxa3P02831 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxa3P02831 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxa3P02831 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC9.19□□□□□ -0.94
Hoxa3P02831 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxa3P02831 Gm18806-201ENSMUST00000207607 1775 ntBASIC9.19□□□□□ -0.94
Hoxa3P02831 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Hoxa3P02831 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxa3P02831 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxa3P02831 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxa3P02831 Gm5124-202ENSMUST00000132683 2083 ntBASIC9.19□□□□□ -0.94
Hoxa3P02831 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxa3P02831 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Hoxa3P02831 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Hoxa3P02831 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Hoxa3P02831 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hoxa3P02831 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Hoxa3P02831 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hoxa3P02831 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hoxa3P02831 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hoxa3P02831 Gm13135-201ENSMUST00000117628 3121 ntBASIC9.18□□□□□ -0.94
Hoxa3P02831 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hoxa3P02831 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Hoxa3P02831 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Hoxa3P02831 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
Hoxa3P02831 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms