Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc1a6O35544 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc1a6O35544 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Slc1a6O35544 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc1a6O35544 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc1a6O35544 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc1a6O35544 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc1a6O35544 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc1a6O35544 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc1a6O35544 Gm18198-201ENSMUST00000204986 1551 ntBASIC10.73□□□□□ -0.69
Slc1a6O35544 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Slc1a6O35544 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Slc1a6O35544 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc1a6O35544 Gm45124-201ENSMUST00000206723 2755 ntBASIC10.72□□□□□ -0.69
Slc1a6O35544 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Slc1a6O35544 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc1a6O35544 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Slc1a6O35544 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc1a6O35544 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Slc1a6O35544 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc1a6O35544 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC10.72□□□□□ -0.69
Slc1a6O35544 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc1a6O35544 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc1a6O35544 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc1a6O35544 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc1a6O35544 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc1a6O35544 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Slc1a6O35544 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Slc1a6O35544 Gm13035-201ENSMUST00000117496 342 ntBASIC10.72□□□□□ -0.69
Slc1a6O35544 Gm7851-201ENSMUST00000117574 323 ntBASIC10.72□□□□□ -0.69
Slc1a6O35544 Gm12266-201ENSMUST00000120311 962 ntBASIC10.72□□□□□ -0.69
Slc1a6O35544 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC10.72□□□□□ -0.69
Slc1a6O35544 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC10.72□□□□□ -0.69
Slc1a6O35544 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Slc1a6O35544 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Slc1a6O35544 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.72□□□□□ -0.69
Slc1a6O35544 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Slc1a6O35544 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc1a6O35544 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc1a6O35544 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC10.72□□□□□ -0.69
Slc1a6O35544 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC10.72□□□□□ -0.69
Slc1a6O35544 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC10.72□□□□□ -0.69
Slc1a6O35544 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC10.72□□□□□ -0.69
Slc1a6O35544 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC10.72□□□□□ -0.69
Slc1a6O35544 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc1a6O35544 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Slc1a6O35544 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Slc1a6O35544 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc1a6O35544 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc1a6O35544 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Slc1a6O35544 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Slc1a6O35544 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC10.72□□□□□ -0.69
Slc1a6O35544 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc1a6O35544 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Slc1a6O35544 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc1a6O35544 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Slc1a6O35544 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc1a6O35544 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Slc1a6O35544 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Slc1a6O35544 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Slc1a6O35544 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Slc1a6O35544 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Slc1a6O35544 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Slc1a6O35544 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC10.71□□□□□ -0.69
Slc1a6O35544 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC10.71□□□□□ -0.69
Slc1a6O35544 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Slc1a6O35544 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Slc1a6O35544 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Slc1a6O35544 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10.71□□□□□ -0.69
Slc1a6O35544 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Slc1a6O35544 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Slc1a6O35544 Gm15615-201ENSMUST00000118876 198 ntBASIC10.71□□□□□ -0.69
Slc1a6O35544 Gm14395-201ENSMUST00000120494 563 ntBASIC10.71□□□□□ -0.69
Slc1a6O35544 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Slc1a6O35544 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Slc1a6O35544 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC10.71□□□□□ -0.69
Slc1a6O35544 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC10.71□□□□□ -0.69
Slc1a6O35544 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
Slc1a6O35544 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Slc1a6O35544 Gm17040-202ENSMUST00000170597 889 ntBASIC10.71□□□□□ -0.69
Slc1a6O35544 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Slc1a6O35544 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Slc1a6O35544 Gm37981-201ENSMUST00000194280 535 ntBASIC10.71□□□□□ -0.69
Slc1a6O35544 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC10.71□□□□□ -0.69
Slc1a6O35544 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Slc1a6O35544 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC10.71□□□□□ -0.69
Slc1a6O35544 Gm18165-201ENSMUST00000217426 928 ntBASIC10.71□□□□□ -0.69
Slc1a6O35544 CT573034.1-201ENSMUST00000222983 313 ntBASIC10.71□□□□□ -0.69
Slc1a6O35544 CT009713.8-201ENSMUST00000225448 560 ntBASIC10.71□□□□□ -0.69
Slc1a6O35544 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Slc1a6O35544 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Slc1a6O35544 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Slc1a6O35544 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Slc1a6O35544 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Slc1a6O35544 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Slc1a6O35544 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Slc1a6O35544 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Slc1a6O35544 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Slc1a6O35544 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Slc1a6O35544 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms