Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc180J3QNE4 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Ccdc180J3QNE4 Bgn-207ENSMUST00000169489 1574 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Ccdc180J3QNE4 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc180J3QNE4 Gm15793-201ENSMUST00000121857 495 ntBASIC19.66■□□□□ 0.74
Ccdc180J3QNE4 Gm16193-201ENSMUST00000125903 778 ntTSL 3 BASIC19.66■□□□□ 0.74
Ccdc180J3QNE4 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC19.66■□□□□ 0.74
Ccdc180J3QNE4 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc180J3QNE4 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC19.66■□□□□ 0.74
Ccdc180J3QNE4 Gm7672-201ENSMUST00000180915 872 ntBASIC19.66■□□□□ 0.74
Ccdc180J3QNE4 CT025642.1-201ENSMUST00000224734 1219 ntBASIC19.66■□□□□ 0.74
Ccdc180J3QNE4 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc180J3QNE4 Esp6-201ENSMUST00000097324 658 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc180J3QNE4 Olfr1219-201ENSMUST00000099797 936 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ccdc180J3QNE4 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Ccdc180J3QNE4 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ccdc180J3QNE4 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc180J3QNE4 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc180J3QNE4 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc180J3QNE4 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc180J3QNE4 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc180J3QNE4 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc180J3QNE4 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Ccdc180J3QNE4 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc180J3QNE4 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc180J3QNE4 Gm6783-201ENSMUST00000120916 1437 ntBASIC19.66■□□□□ 0.74
Ccdc180J3QNE4 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc180J3QNE4 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc180J3QNE4 Spaca9-201ENSMUST00000102877 671 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc180J3QNE4 Gm13286-201ENSMUST00000117750 537 ntBASIC19.65■□□□□ 0.74
Ccdc180J3QNE4 Gm15373-201ENSMUST00000121495 214 ntBASIC19.65■□□□□ 0.74
Ccdc180J3QNE4 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc180J3QNE4 Gm4960-201ENSMUST00000182928 1001 ntBASIC19.65■□□□□ 0.74
Ccdc180J3QNE4 Gm28391-201ENSMUST00000185202 379 ntBASIC19.65■□□□□ 0.74
Ccdc180J3QNE4 Gm29528-201ENSMUST00000186699 379 ntBASIC19.65■□□□□ 0.74
Ccdc180J3QNE4 Gm29526-201ENSMUST00000187217 379 ntBASIC19.65■□□□□ 0.74
Ccdc180J3QNE4 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC19.65■□□□□ 0.74
Ccdc180J3QNE4 Gm9035-201ENSMUST00000218318 1697 ntBASIC19.65■□□□□ 0.74
Ccdc180J3QNE4 Gm38034-201ENSMUST00000193915 2069 ntBASIC19.65■□□□□ 0.74
Ccdc180J3QNE4 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc180J3QNE4 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Ccdc180J3QNE4 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC19.65■□□□□ 0.74
Ccdc180J3QNE4 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc180J3QNE4 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc180J3QNE4 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC19.65■□□□□ 0.74
Ccdc180J3QNE4 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc180J3QNE4 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Ccdc180J3QNE4 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc180J3QNE4 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc180J3QNE4 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC19.65■□□□□ 0.74
Ccdc180J3QNE4 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Ccdc180J3QNE4 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC19.65■□□□□ 0.74
Ccdc180J3QNE4 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc180J3QNE4 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC19.65■□□□□ 0.74
Ccdc180J3QNE4 Gm20694-201ENSMUST00000176943 404 ntBASIC19.65■□□□□ 0.74
Ccdc180J3QNE4 Gm37301-201ENSMUST00000195412 568 ntBASIC19.65■□□□□ 0.74
Ccdc180J3QNE4 AC130217.1-201ENSMUST00000224146 909 ntBASIC19.65■□□□□ 0.74
Ccdc180J3QNE4 AC123061.1-201ENSMUST00000228021 999 ntBASIC19.65■□□□□ 0.74
Ccdc180J3QNE4 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc180J3QNE4 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc180J3QNE4 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc180J3QNE4 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc180J3QNE4 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ccdc180J3QNE4 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ccdc180J3QNE4 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ccdc180J3QNE4 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ccdc180J3QNE4 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Ccdc180J3QNE4 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc180J3QNE4 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC19.64■□□□□ 0.73
Ccdc180J3QNE4 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc180J3QNE4 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc180J3QNE4 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc180J3QNE4 Gm43622-201ENSMUST00000200140 2019 ntBASIC19.64■□□□□ 0.73
Ccdc180J3QNE4 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc180J3QNE4 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC19.64■□□□□ 0.73
Ccdc180J3QNE4 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc180J3QNE4 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc180J3QNE4 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc180J3QNE4 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC19.64■□□□□ 0.73
Ccdc180J3QNE4 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc180J3QNE4 Gm18443-201ENSMUST00000185358 556 ntBASIC19.64■□□□□ 0.73
Ccdc180J3QNE4 AC124356.1-201ENSMUST00000221469 698 ntBASIC19.64■□□□□ 0.73
Ccdc180J3QNE4 AC124581.2-201ENSMUST00000225459 282 ntBASIC19.64■□□□□ 0.73
Ccdc180J3QNE4 AC118639.1-202ENSMUST00000226957 653 ntBASIC19.64■□□□□ 0.73
Ccdc180J3QNE4 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc180J3QNE4 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
Ccdc180J3QNE4 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Ccdc180J3QNE4 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc180J3QNE4 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc180J3QNE4 Erich3-203ENSMUST00000189969 3460 ntBASIC19.63■□□□□ 0.73
Ccdc180J3QNE4 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Ccdc180J3QNE4 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc180J3QNE4 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc180J3QNE4 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc180J3QNE4 Mir598-201ENSMUST00000102094 79 ntBASIC19.63■□□□□ 0.73
Ccdc180J3QNE4 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC19.63■□□□□ 0.73
Ccdc180J3QNE4 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ccdc180J3QNE4 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc180J3QNE4 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ccdc180J3QNE4 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms