Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.25□□□□□ -0.61
Atf6F6VAN0 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.25□□□□□ -0.61
Atf6F6VAN0 AC154461.3-201ENSMUST00000224831 573 ntBASIC11.25□□□□□ -0.61
Atf6F6VAN0 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6F6VAN0 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6F6VAN0 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6F6VAN0 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.25□□□□□ -0.61
Atf6F6VAN0 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6F6VAN0 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.25□□□□□ -0.61
Atf6F6VAN0 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.25□□□□□ -0.61
Atf6F6VAN0 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6F6VAN0 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6F6VAN0 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Atf6F6VAN0 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Atf6F6VAN0 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC11.25□□□□□ -0.61
Atf6F6VAN0 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6F6VAN0 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6F6VAN0 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.25□□□□□ -0.61
Atf6F6VAN0 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6F6VAN0 Gm42815-201ENSMUST00000198787 1470 ntBASIC11.25□□□□□ -0.61
Atf6F6VAN0 Gm43375-201ENSMUST00000196705 2480 ntBASIC11.25□□□□□ -0.61
Atf6F6VAN0 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6F6VAN0 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6F6VAN0 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Atf6F6VAN0 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atf6F6VAN0 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Atf6F6VAN0 Gm45041-201ENSMUST00000207366 3108 ntBASIC11.24□□□□□ -0.61
Atf6F6VAN0 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atf6F6VAN0 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Atf6F6VAN0 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Atf6F6VAN0 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC11.24□□□□□ -0.61
Atf6F6VAN0 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Atf6F6VAN0 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Atf6F6VAN0 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Atf6F6VAN0 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atf6F6VAN0 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atf6F6VAN0 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Atf6F6VAN0 Gm6768-201ENSMUST00000022467 1878 ntBASIC11.24□□□□□ -0.61
Atf6F6VAN0 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Atf6F6VAN0 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.24□□□□□ -0.61
Atf6F6VAN0 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.24□□□□□ -0.61
Atf6F6VAN0 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Atf6F6VAN0 Mir1943-201ENSMUST00000158276 73 ntBASIC11.24□□□□□ -0.61
Atf6F6VAN0 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.24□□□□□ -0.61
Atf6F6VAN0 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Atf6F6VAN0 Gm28746-201ENSMUST00000187453 380 ntBASIC11.24□□□□□ -0.61
Atf6F6VAN0 Platr10-202ENSMUST00000191479 818 ntBASIC11.24□□□□□ -0.61
Atf6F6VAN0 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Atf6F6VAN0 Gm18561-201ENSMUST00000206027 804 ntBASIC11.24□□□□□ -0.61
Atf6F6VAN0 Gm9463-201ENSMUST00000206707 601 ntBASIC11.24□□□□□ -0.61
Atf6F6VAN0 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.24□□□□□ -0.61
Atf6F6VAN0 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.24□□□□□ -0.61
Atf6F6VAN0 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.24□□□□□ -0.61
Atf6F6VAN0 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.24□□□□□ -0.61
Atf6F6VAN0 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Atf6F6VAN0 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Atf6F6VAN0 Gm25125-201ENSMUST00000083340 136 ntBASIC11.24□□□□□ -0.61
Atf6F6VAN0 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.24□□□□□ -0.61
Atf6F6VAN0 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atf6F6VAN0 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atf6F6VAN0 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atf6F6VAN0 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC11.24□□□□□ -0.61
Atf6F6VAN0 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Atf6F6VAN0 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atf6F6VAN0 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atf6F6VAN0 Gm6024-201ENSMUST00000117850 1558 ntBASIC11.24□□□□□ -0.61
Atf6F6VAN0 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Atf6F6VAN0 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atf6F6VAN0 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atf6F6VAN0 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.23□□□□□ -0.61
Atf6F6VAN0 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC11.23□□□□□ -0.61
Atf6F6VAN0 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Gm7467-201ENSMUST00000185173 652 ntBASIC11.23□□□□□ -0.61
Atf6F6VAN0 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Gm7255-201ENSMUST00000187371 908 ntBASIC11.23□□□□□ -0.61
Atf6F6VAN0 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.23□□□□□ -0.61
Atf6F6VAN0 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.23□□□□□ -0.61
Atf6F6VAN0 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.23□□□□□ -0.61
Atf6F6VAN0 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Gm18042-201ENSMUST00000219887 790 ntBASIC11.23□□□□□ -0.61
Atf6F6VAN0 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC11.23□□□□□ -0.61
Atf6F6VAN0 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms