Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Dspp-201ENSMUST00000112771 4431 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Vma21-201ENSMUST00000114575 4290 ntTSL 2 BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Gm5822-201ENSMUST00000161562 1378 ntBASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Smarca1-202ENSMUST00000088973 4798 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Tada2a-201ENSMUST00000018795 2151 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Gm43143-201ENSMUST00000196083 2023 ntBASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Gm37003-201ENSMUST00000194702 2827 ntBASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Ehmt1-210ENSMUST00000147147 5953 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Tyw3-204ENSMUST00000170461 4270 ntTSL 5 BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Gm10748-202ENSMUST00000194396 2379 ntBASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Snhg11-201ENSMUST00000109488 5864 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Gm8566-201ENSMUST00000120174 465 ntBASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Gm17825-201ENSMUST00000206836 794 ntBASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Gm18054-201ENSMUST00000207539 555 ntBASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Gm21769-201ENSMUST00000211922 111 ntBASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Sgk3-204ENSMUST00000171265 3680 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Casz1-201ENSMUST00000094464 4349 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 9130019O22Rik-201ENSMUST00000049052 3878 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Brca2-201ENSMUST00000044620 10724 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Gm28624-201ENSMUST00000186430 2131 ntBASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Stra6-201ENSMUST00000034880 2993 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Gm38273-201ENSMUST00000194987 2382 ntBASIC8.75□□□□□ -1.01
Gm12887B1AVM1 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Ptk2b-202ENSMUST00000089250 3903 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Gm7993-201ENSMUST00000200970 1384 ntBASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Srpk1-204ENSMUST00000130643 4465 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 AC154220.1-201ENSMUST00000225033 1705 ntBASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Gramd1b-202ENSMUST00000118159 2781 ntTSL 5 BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Il12rb2-201ENSMUST00000018485 2998 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Amer3-201ENSMUST00000052670 4392 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 2310002L09Rik-202ENSMUST00000095023 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Sall4-203ENSMUST00000103074 3741 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Inhbe-201ENSMUST00000059718 5319 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Pogk-206ENSMUST00000169324 7034 ntAPPRIS ALT2 TSL 3 BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Aplp2-201ENSMUST00000072634 3634 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Zfp512-201ENSMUST00000076264 3299 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Gm25661-201ENSMUST00000157704 296 ntBASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Gm27572-201ENSMUST00000183702 255 ntBASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 AC151275.1-201ENSMUST00000224870 585 ntBASIC8.74□□□□□ -1.01
Gm12887B1AVM1 CT025602.2-201ENSMUST00000226553 772 ntBASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Smarcc2-203ENSMUST00000105235 4032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Gm37660-201ENSMUST00000192754 1732 ntBASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Atp1a3-202ENSMUST00000102858 3895 ntTSL 2 BASIC8.74□□□□□ -1.01
Gm12887B1AVM1 Galnt16-201ENSMUST00000021558 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms