Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ube4bQ9ES00 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ube4bQ9ES00 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.46□□□□□ -0.73
Ube4bQ9ES00 Gm11661-201ENSMUST00000121761 1327 ntBASIC10.46□□□□□ -0.73
Ube4bQ9ES00 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.46□□□□□ -0.74
Ube4bQ9ES00 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ube4bQ9ES00 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Ube4bQ9ES00 AC154849.3-201ENSMUST00000223733 1660 ntBASIC10.46□□□□□ -0.74
Ube4bQ9ES00 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ube4bQ9ES00 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC10.46□□□□□ -0.74
Ube4bQ9ES00 Gm7932-202ENSMUST00000205047 2194 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Ube4bQ9ES00 AC122293.1-201ENSMUST00000218333 2231 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Ube4bQ9ES00 Hemgn-201ENSMUST00000071096 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ube4bQ9ES00 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ube4bQ9ES00 Gm10652-201ENSMUST00000199790 2622 ntBASIC10.46□□□□□ -0.74
Ube4bQ9ES00 Gm13140-201ENSMUST00000119840 3151 ntBASIC10.46□□□□□ -0.74
Ube4bQ9ES00 Capn3-202ENSMUST00000028749 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ube4bQ9ES00 Ralgps2-203ENSMUST00000171292 3346 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.74
Ube4bQ9ES00 Vwce-201ENSMUST00000055115 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ube4bQ9ES00 Tnk2-206ENSMUST00000115125 4313 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Ube4bQ9ES00 Ccdc186-202ENSMUST00000118592 6445 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Inhbe-201ENSMUST00000059718 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Fgfr1-213ENSMUST00000167764 2915 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Dync1h1-201ENSMUST00000018851 14342 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Trim69-201ENSMUST00000036089 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.45□□□□□ -0.74
Ube4bQ9ES00 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Nek4-203ENSMUST00000226551 4098 ntAPPRIS ALT2 BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Gm14071-201ENSMUST00000117817 509 ntBASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Gm15276-201ENSMUST00000145953 498 ntBASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Mir1938-201ENSMUST00000158746 100 ntBASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Gm27441-201ENSMUST00000185000 105 ntBASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Gm38319-201ENSMUST00000194537 1266 ntBASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Gm43758-201ENSMUST00000199500 367 ntBASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Gm4607-201ENSMUST00000206649 577 ntBASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.45□□□□□ -0.74
Ube4bQ9ES00 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 AC123665.1-201ENSMUST00000228204 438 ntBASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Gm5455-201ENSMUST00000058710 715 ntBASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Wnt5a-202ENSMUST00000112272 3650 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Ilf3-204ENSMUST00000213603 3430 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Actn2-203ENSMUST00000168193 2920 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Agbl4-203ENSMUST00000106587 2631 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Extl1-201ENSMUST00000030643 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Fadd-201ENSMUST00000033394 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 4933414I15Rik-201ENSMUST00000109123 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Aqp7-202ENSMUST00000054945 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Idua-201ENSMUST00000071650 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Tmem184b-205ENSMUST00000228002 3315 ntBASIC10.45□□□□□ -0.74
Ube4bQ9ES00 Dlgap2-208ENSMUST00000150247 3138 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Ube4bQ9ES00 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ube4bQ9ES00 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ube4bQ9ES00 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ube4bQ9ES00 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.44□□□□□ -0.74
Ube4bQ9ES00 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC10.44□□□□□ -0.74
Ube4bQ9ES00 Atg9a-201ENSMUST00000040689 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ube4bQ9ES00 1700055D18Rik-202ENSMUST00000186030 3720 ntBASIC10.44□□□□□ -0.74
Ube4bQ9ES00 Dnm3-201ENSMUST00000070330 4601 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ube4bQ9ES00 Grpr-201ENSMUST00000033730 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ube4bQ9ES00 Gm10634-202ENSMUST00000188891 2464 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ube4bQ9ES00 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ube4bQ9ES00 Plscr4-201ENSMUST00000034941 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ube4bQ9ES00 Fam217a-202ENSMUST00000223834 2253 ntAPPRIS ALT2 BASIC10.44□□□□□ -0.74
Ube4bQ9ES00 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ube4bQ9ES00 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Ube4bQ9ES00 Slc7a14-202ENSMUST00000108245 3080 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ube4bQ9ES00 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Ube4bQ9ES00 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ube4bQ9ES00 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ube4bQ9ES00 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.44□□□□□ -0.74
Ube4bQ9ES00 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.44□□□□□ -0.74
Ube4bQ9ES00 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.44□□□□□ -0.74
Ube4bQ9ES00 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms