Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Gm5739-201ENSMUST00000208601 1703 ntBASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Gm14807-201ENSMUST00000116640 983 ntBASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Gm14592-201ENSMUST00000117201 560 ntBASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Gm4982-201ENSMUST00000160440 1098 ntBASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Gm28324-201ENSMUST00000187913 264 ntBASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Gm43667-201ENSMUST00000198616 1095 ntBASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Gm9111-201ENSMUST00000219394 709 ntBASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Id2-203ENSMUST00000222667 958 ntBASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Gm21759-201ENSMUST00000178345 1828 ntBASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Hyal2-206ENSMUST00000195681 2968 ntBASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 Gm3828-201ENSMUST00000121817 257 ntBASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 Gm22379-201ENSMUST00000157480 131 ntBASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 AC153152.3-201ENSMUST00000222188 1135 ntBASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Chmp2aQ9DB34 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC11.4□□□□□ -0.59
Chmp2aQ9DB34 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Chmp2aQ9DB34 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Chmp2aQ9DB34 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Chmp2aQ9DB34 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Chmp2aQ9DB34 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC11.4□□□□□ -0.59
Chmp2aQ9DB34 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Chmp2aQ9DB34 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Chmp2aQ9DB34 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC11.4□□□□□ -0.59
Chmp2aQ9DB34 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.4□□□□□ -0.59
Chmp2aQ9DB34 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Mir453-201ENSMUST00000104732 82 ntBASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Chmp2aQ9DB34 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms