Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Samd13-201ENSMUST00000124931 905 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Cdh23Q99PF4 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cdh23Q99PF4 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Cdh23Q99PF4 Gm29266-201ENSMUST00000190392 600 ntTSL 3 BASIC10.78□□□□□ -0.68
Cdh23Q99PF4 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC10.78□□□□□ -0.68
Cdh23Q99PF4 Ccdc153-206ENSMUST00000216632 800 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Cdh23Q99PF4 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cdh23Q99PF4 Gm27194-201ENSMUST00000175753 2936 ntBASIC10.78□□□□□ -0.68
Cdh23Q99PF4 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cdh23Q99PF4 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cdh23Q99PF4 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cdh23Q99PF4 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Cdh23Q99PF4 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cdh23Q99PF4 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cdh23Q99PF4 Gm9434-201ENSMUST00000118975 813 ntBASIC10.77□□□□□ -0.68
Cdh23Q99PF4 Gm12338-201ENSMUST00000122170 192 ntBASIC10.77□□□□□ -0.68
Cdh23Q99PF4 Gm11493-201ENSMUST00000134567 566 ntTSL 3 BASIC10.77□□□□□ -0.68
Cdh23Q99PF4 Dtx3-205ENSMUST00000137151 346 ntTSL 3 BASIC10.77□□□□□ -0.68
Cdh23Q99PF4 Airn-204ENSMUST00000160932 842 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Cdh23Q99PF4 1700092M07Rik-201ENSMUST00000163172 380 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cdh23Q99PF4 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cdh23Q99PF4 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Cdh23Q99PF4 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Cdh23Q99PF4 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Cdh23Q99PF4 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cdh23Q99PF4 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Cdh23Q99PF4 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cdh23Q99PF4 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdh23Q99PF4 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdh23Q99PF4 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdh23Q99PF4 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Cdh23Q99PF4 Serpina1e-202ENSMUST00000122229 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdh23Q99PF4 Gm25561-201ENSMUST00000104607 125 ntBASIC10.77□□□□□ -0.69
Cdh23Q99PF4 Gm26619-201ENSMUST00000180396 1073 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cdh23Q99PF4 Mir7011-201ENSMUST00000183768 73 ntBASIC10.77□□□□□ -0.69
Cdh23Q99PF4 Gm43674-201ENSMUST00000196313 791 ntBASIC10.77□□□□□ -0.69
Cdh23Q99PF4 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.77□□□□□ -0.69
Cdh23Q99PF4 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cdh23Q99PF4 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdh23Q99PF4 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdh23Q99PF4 Aqp7-202ENSMUST00000054945 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdh23Q99PF4 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdh23Q99PF4 Micalcl-202ENSMUST00000051308 2399 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdh23Q99PF4 H2-M10.4-201ENSMUST00000057502 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdh23Q99PF4 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdh23Q99PF4 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdh23Q99PF4 Dytn-201ENSMUST00000090313 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdh23Q99PF4 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdh23Q99PF4 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Cdh23Q99PF4 H2afb2-201ENSMUST00000118616 348 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Cdh23Q99PF4 Gm26208-201ENSMUST00000158677 124 ntBASIC10.77□□□□□ -0.69
Cdh23Q99PF4 Arpp19-207ENSMUST00000169188 216 ntTSL 5 BASIC10.77□□□□□ -0.69
Cdh23Q99PF4 Mir5108-201ENSMUST00000175276 85 ntBASIC10.77□□□□□ -0.69
Cdh23Q99PF4 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cdh23Q99PF4 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Cdh23Q99PF4 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cdh23Q99PF4 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Rpusd4-201ENSMUST00000034543 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Gm12464-201ENSMUST00000121385 1016 ntBASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Gm14323-201ENSMUST00000122418 627 ntBASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Gm37016-201ENSMUST00000195507 660 ntTSL 5 BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Htr1b-201ENSMUST00000051005 1273 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Gm45416-201ENSMUST00000209713 2201 ntBASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Gm7847-201ENSMUST00000151645 777 ntBASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Gm5244-201ENSMUST00000164001 339 ntBASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Gm35501-201ENSMUST00000213492 783 ntTSL 2 BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Rad52-212ENSMUST00000162461 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Gabarap-202ENSMUST00000108592 750 ntTSL 3 BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Gm38191-201ENSMUST00000194509 770 ntTSL 5 BASIC10.76□□□□□ -0.69
Cdh23Q99PF4 Gm32098-201ENSMUST00000211305 479 ntTSL 5 BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 103.2 ms