Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Gm12028-201ENSMUST00000118065 436 ntBASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Gm13624-201ENSMUST00000120263 462 ntBASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Gm13281-201ENSMUST00000120871 567 ntBASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Gm6291-201ENSMUST00000179994 309 ntBASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Gm5976-201ENSMUST00000180794 996 ntBASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Gm6352-201ENSMUST00000203583 1134 ntBASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Gm6794-201ENSMUST00000203829 457 ntBASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Gm45893-201ENSMUST00000211899 247 ntBASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 AC125539.1-201ENSMUST00000227423 622 ntBASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Gm5822-201ENSMUST00000161562 1378 ntBASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx6-1Q99MA9 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Gm25394-201ENSMUST00000157338 133 ntBASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Gm16107-201ENSMUST00000162523 862 ntBASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Gm7928-201ENSMUST00000181249 701 ntBASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Gm45258-201ENSMUST00000210042 853 ntBASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 AC129323.1-201ENSMUST00000216733 470 ntBASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 AC164429.1-201ENSMUST00000224210 518 ntBASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 AC118639.1-202ENSMUST00000226957 653 ntBASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Gm5278-201ENSMUST00000055957 552 ntBASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nkx6-1Q99MA9 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms