Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Scrt1Q99M85 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Scrt1Q99M85 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Scrt1Q99M85 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Scrt1Q99M85 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Scrt1Q99M85 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Scrt1Q99M85 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Scrt1Q99M85 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Scrt1Q99M85 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Scrt1Q99M85 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Scrt1Q99M85 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.86
Scrt1Q99M85 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Scrt1Q99M85 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Scrt1Q99M85 Gm19327-201ENSMUST00000220651 3271 ntBASIC9.65□□□□□ -0.86
Scrt1Q99M85 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC9.65□□□□□ -0.86
Scrt1Q99M85 Gm6158-201ENSMUST00000109467 904 ntBASIC9.65□□□□□ -0.86
Scrt1Q99M85 Gm12389-201ENSMUST00000117696 418 ntBASIC9.65□□□□□ -0.86
Scrt1Q99M85 Gm13286-201ENSMUST00000117750 537 ntBASIC9.65□□□□□ -0.86
Scrt1Q99M85 Gm15374-201ENSMUST00000119313 844 ntBASIC9.65□□□□□ -0.86
Scrt1Q99M85 Gm16459-201ENSMUST00000121443 686 ntBASIC9.65□□□□□ -0.86
Scrt1Q99M85 Gm5395-201ENSMUST00000121650 915 ntBASIC9.65□□□□□ -0.86
Scrt1Q99M85 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Scrt1Q99M85 Gm24992-201ENSMUST00000157412 130 ntBASIC9.65□□□□□ -0.86
Scrt1Q99M85 Gm4462-201ENSMUST00000166453 492 ntBASIC9.65□□□□□ -0.86
Scrt1Q99M85 Gm6114-201ENSMUST00000182472 968 ntBASIC9.65□□□□□ -0.86
Scrt1Q99M85 Gm5335-201ENSMUST00000182995 1000 ntBASIC9.65□□□□□ -0.86
Scrt1Q99M85 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC9.65□□□□□ -0.86
Scrt1Q99M85 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC9.65□□□□□ -0.86
Scrt1Q99M85 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Scrt1Q99M85 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC9.65□□□□□ -0.86
Scrt1Q99M85 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Scrt1Q99M85 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Scrt1Q99M85 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Scrt1Q99M85 Gm31274-201ENSMUST00000197356 229 ntBASIC9.65□□□□□ -0.86
Scrt1Q99M85 Gm42660-201ENSMUST00000197733 947 ntBASIC9.65□□□□□ -0.86
Scrt1Q99M85 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC9.65□□□□□ -0.86
Scrt1Q99M85 Gm44814-201ENSMUST00000207018 434 ntBASIC9.65□□□□□ -0.86
Scrt1Q99M85 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC9.65□□□□□ -0.86
Scrt1Q99M85 Gm4903-201ENSMUST00000210462 405 ntBASIC9.65□□□□□ -0.86
Scrt1Q99M85 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Scrt1Q99M85 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Scrt1Q99M85 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Scrt1Q99M85 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC9.65□□□□□ -0.86
Scrt1Q99M85 CT010486.3-201ENSMUST00000224555 811 ntBASIC9.65□□□□□ -0.86
Scrt1Q99M85 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Scrt1Q99M85 Gm5449-201ENSMUST00000081132 357 ntBASIC9.65□□□□□ -0.86
Scrt1Q99M85 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Scrt1Q99M85 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Scrt1Q99M85 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Scrt1Q99M85 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Scrt1Q99M85 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Scrt1Q99M85 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Scrt1Q99M85 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Scrt1Q99M85 AC165351.1-201ENSMUST00000219078 2020 ntBASIC9.65□□□□□ -0.87
Scrt1Q99M85 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Scrt1Q99M85 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Scrt1Q99M85 Gm14005-210ENSMUST00000225087 1413 ntBASIC9.65□□□□□ -0.87
Scrt1Q99M85 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Scrt1Q99M85 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Scrt1Q99M85 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Scrt1Q99M85 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC9.64□□□□□ -0.87
Scrt1Q99M85 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Gm44369-201ENSMUST00000204543 2175 ntBASIC9.64□□□□□ -0.87
Scrt1Q99M85 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Scrt1Q99M85 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC9.64□□□□□ -0.87
Scrt1Q99M85 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC9.64□□□□□ -0.87
Scrt1Q99M85 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Gm45828-201ENSMUST00000206938 1836 ntBASIC9.64□□□□□ -0.87
Scrt1Q99M85 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Gm15528-201ENSMUST00000117821 864 ntBASIC9.64□□□□□ -0.87
Scrt1Q99M85 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Scrt1Q99M85 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC9.64□□□□□ -0.87
Scrt1Q99M85 Gm25343-201ENSMUST00000157460 107 ntBASIC9.64□□□□□ -0.87
Scrt1Q99M85 Gm3329-201ENSMUST00000159873 556 ntBASIC9.64□□□□□ -0.87
Scrt1Q99M85 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms