Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
RtcbQ99LF4 AC134860.2-201ENSMUST00000225277 1036 ntBASIC13.52□□□□□ -0.25
RtcbQ99LF4 Gm8615-201ENSMUST00000025307 771 ntBASIC13.52□□□□□ -0.25
RtcbQ99LF4 Mir341-201ENSMUST00000093593 96 ntBASIC13.52□□□□□ -0.25
RtcbQ99LF4 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
RtcbQ99LF4 Gfra2-203ENSMUST00000227697 1323 ntBASIC13.52□□□□□ -0.25
RtcbQ99LF4 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RtcbQ99LF4 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RtcbQ99LF4 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
RtcbQ99LF4 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
RtcbQ99LF4 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC13.52□□□□□ -0.25
RtcbQ99LF4 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC13.52□□□□□ -0.25
RtcbQ99LF4 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RtcbQ99LF4 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC13.52□□□□□ -0.25
RtcbQ99LF4 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RtcbQ99LF4 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RtcbQ99LF4 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RtcbQ99LF4 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RtcbQ99LF4 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RtcbQ99LF4 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RtcbQ99LF4 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RtcbQ99LF4 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RtcbQ99LF4 Matn2-203ENSMUST00000226766 3252 ntBASIC13.52□□□□□ -0.25
RtcbQ99LF4 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RtcbQ99LF4 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RtcbQ99LF4 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RtcbQ99LF4 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RtcbQ99LF4 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RtcbQ99LF4 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RtcbQ99LF4 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.51□□□□□ -0.25
RtcbQ99LF4 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RtcbQ99LF4 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RtcbQ99LF4 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RtcbQ99LF4 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.51□□□□□ -0.25
RtcbQ99LF4 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RtcbQ99LF4 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
RtcbQ99LF4 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC13.51□□□□□ -0.25
RtcbQ99LF4 Gm12435-201ENSMUST00000118949 1016 ntBASIC13.51□□□□□ -0.25
RtcbQ99LF4 Gm12950-201ENSMUST00000121683 417 ntBASIC13.51□□□□□ -0.25
RtcbQ99LF4 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
RtcbQ99LF4 Gm24346-201ENSMUST00000158712 194 ntBASIC13.51□□□□□ -0.25
RtcbQ99LF4 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC13.51□□□□□ -0.25
RtcbQ99LF4 Gm20694-201ENSMUST00000176943 404 ntBASIC13.51□□□□□ -0.25
RtcbQ99LF4 Gm8525-201ENSMUST00000189674 861 ntBASIC13.51□□□□□ -0.25
RtcbQ99LF4 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RtcbQ99LF4 Gm9409-201ENSMUST00000197017 316 ntBASIC13.51□□□□□ -0.25
RtcbQ99LF4 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC13.51□□□□□ -0.25
RtcbQ99LF4 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC13.51□□□□□ -0.25
RtcbQ99LF4 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RtcbQ99LF4 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
RtcbQ99LF4 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RtcbQ99LF4 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RtcbQ99LF4 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RtcbQ99LF4 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RtcbQ99LF4 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RtcbQ99LF4 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RtcbQ99LF4 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RtcbQ99LF4 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RtcbQ99LF4 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RtcbQ99LF4 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RtcbQ99LF4 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
RtcbQ99LF4 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RtcbQ99LF4 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RtcbQ99LF4 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RtcbQ99LF4 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RtcbQ99LF4 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RtcbQ99LF4 AC154197.1-201ENSMUST00000225136 1382 ntBASIC13.5□□□□□ -0.25
RtcbQ99LF4 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
RtcbQ99LF4 Mir598-201ENSMUST00000102094 79 ntBASIC13.5□□□□□ -0.25
RtcbQ99LF4 Snora68-201ENSMUST00000104375 131 ntBASIC13.5□□□□□ -0.25
RtcbQ99LF4 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RtcbQ99LF4 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RtcbQ99LF4 Gm15626-201ENSMUST00000117478 868 ntBASIC13.5□□□□□ -0.25
RtcbQ99LF4 Gm8876-201ENSMUST00000120768 1122 ntBASIC13.5□□□□□ -0.25
RtcbQ99LF4 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC13.5□□□□□ -0.25
RtcbQ99LF4 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RtcbQ99LF4 Gm7211-201ENSMUST00000172692 1118 ntBASIC13.5□□□□□ -0.25
RtcbQ99LF4 Gm37009-201ENSMUST00000193297 361 ntBASIC13.5□□□□□ -0.25
RtcbQ99LF4 Gm2474-201ENSMUST00000195162 559 ntBASIC13.5□□□□□ -0.25
RtcbQ99LF4 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
RtcbQ99LF4 Gm7047-201ENSMUST00000196224 1063 ntBASIC13.5□□□□□ -0.25
RtcbQ99LF4 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC13.5□□□□□ -0.25
RtcbQ99LF4 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC13.5□□□□□ -0.25
RtcbQ99LF4 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC13.5□□□□□ -0.25
RtcbQ99LF4 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC13.5□□□□□ -0.25
RtcbQ99LF4 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
RtcbQ99LF4 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
RtcbQ99LF4 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RtcbQ99LF4 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RtcbQ99LF4 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
RtcbQ99LF4 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RtcbQ99LF4 Pck2-205ENSMUST00000226352 2784 ntBASIC13.5□□□□□ -0.25
RtcbQ99LF4 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RtcbQ99LF4 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RtcbQ99LF4 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RtcbQ99LF4 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RtcbQ99LF4 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
RtcbQ99LF4 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RtcbQ99LF4 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RtcbQ99LF4 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms