Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Gm8111-201ENSMUST00000117659 987 ntBASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Gm15528-201ENSMUST00000117821 864 ntBASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Gm21778-201ENSMUST00000178779 471 ntBASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Mir6998-201ENSMUST00000183343 64 ntBASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Gm28324-201ENSMUST00000187913 264 ntBASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Gm44329-201ENSMUST00000197469 112 ntBASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 AC114645.1-201ENSMUST00000215831 187 ntBASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Nudt13-207ENSMUST00000224311 1574 ntBASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga4Q91XY4 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
Pcdhga4Q91XY4 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Gm15617-201ENSMUST00000118973 771 ntBASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Gm34023-201ENSMUST00000195539 217 ntBASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Gm42657-201ENSMUST00000201746 211 ntBASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Gm43221-201ENSMUST00000197612 2071 ntBASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga4Q91XY4 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga4Q91XY4 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms