Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim60Q8VI40 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.3□□□□□ -0.6
Trim60Q8VI40 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trim60Q8VI40 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC11.3□□□□□ -0.6
Trim60Q8VI40 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim60Q8VI40 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trim60Q8VI40 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim60Q8VI40 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim60Q8VI40 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim60Q8VI40 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim60Q8VI40 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.3□□□□□ -0.6
Trim60Q8VI40 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim60Q8VI40 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim60Q8VI40 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.3□□□□□ -0.6
Trim60Q8VI40 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim60Q8VI40 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim60Q8VI40 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.3□□□□□ -0.6
Trim60Q8VI40 Gm12986-201ENSMUST00000119037 967 ntBASIC11.3□□□□□ -0.6
Trim60Q8VI40 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.3□□□□□ -0.6
Trim60Q8VI40 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim60Q8VI40 Gm22144-201ENSMUST00000157402 102 ntBASIC11.3□□□□□ -0.6
Trim60Q8VI40 Gm23699-201ENSMUST00000158835 135 ntBASIC11.3□□□□□ -0.6
Trim60Q8VI40 Gm23045-201ENSMUST00000175041 96 ntBASIC11.3□□□□□ -0.6
Trim60Q8VI40 Gm4654-201ENSMUST00000183305 982 ntBASIC11.3□□□□□ -0.6
Trim60Q8VI40 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.3□□□□□ -0.6
Trim60Q8VI40 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trim60Q8VI40 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim60Q8VI40 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.3□□□□□ -0.6
Trim60Q8VI40 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim60Q8VI40 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.3□□□□□ -0.6
Trim60Q8VI40 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim60Q8VI40 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim60Q8VI40 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trim60Q8VI40 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim60Q8VI40 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim60Q8VI40 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim60Q8VI40 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim60Q8VI40 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim60Q8VI40 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim60Q8VI40 Gfra2-203ENSMUST00000227697 1323 ntBASIC11.3□□□□□ -0.6
Trim60Q8VI40 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim60Q8VI40 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim60Q8VI40 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim60Q8VI40 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim60Q8VI40 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim60Q8VI40 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim60Q8VI40 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC11.29□□□□□ -0.6
Trim60Q8VI40 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim60Q8VI40 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim60Q8VI40 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.29□□□□□ -0.6
Trim60Q8VI40 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Trim60Q8VI40 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.29□□□□□ -0.6
Trim60Q8VI40 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim60Q8VI40 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim60Q8VI40 Gm21092-201ENSMUST00000178995 955 ntBASIC11.29□□□□□ -0.6
Trim60Q8VI40 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim60Q8VI40 Gm37852-201ENSMUST00000193027 350 ntBASIC11.29□□□□□ -0.6
Trim60Q8VI40 Gm43138-201ENSMUST00000199123 708 ntBASIC11.29□□□□□ -0.6
Trim60Q8VI40 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC11.29□□□□□ -0.6
Trim60Q8VI40 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.29□□□□□ -0.6
Trim60Q8VI40 Gm45398-201ENSMUST00000210561 165 ntBASIC11.29□□□□□ -0.6
Trim60Q8VI40 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.29□□□□□ -0.6
Trim60Q8VI40 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.29□□□□□ -0.6
Trim60Q8VI40 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.29□□□□□ -0.6
Trim60Q8VI40 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trim60Q8VI40 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim60Q8VI40 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim60Q8VI40 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim60Q8VI40 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim60Q8VI40 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim60Q8VI40 AC154528.2-201ENSMUST00000228432 3023 ntBASIC11.29□□□□□ -0.6
Trim60Q8VI40 Gm45675-201ENSMUST00000211202 3429 ntBASIC11.29□□□□□ -0.6
Trim60Q8VI40 Gm19680-201ENSMUST00000095050 1513 ntBASIC11.29□□□□□ -0.6
Trim60Q8VI40 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim60Q8VI40 Gm28624-201ENSMUST00000186430 2131 ntBASIC11.29□□□□□ -0.6
Trim60Q8VI40 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC11.29□□□□□ -0.6
Trim60Q8VI40 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Trim60Q8VI40 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Trim60Q8VI40 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim60Q8VI40 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim60Q8VI40 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim60Q8VI40 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trim60Q8VI40 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim60Q8VI40 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC11.28□□□□□ -0.6
Trim60Q8VI40 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trim60Q8VI40 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim60Q8VI40 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim60Q8VI40 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.28□□□□□ -0.6
Trim60Q8VI40 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim60Q8VI40 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim60Q8VI40 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim60Q8VI40 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim60Q8VI40 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.28□□□□□ -0.6
Trim60Q8VI40 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC11.28□□□□□ -0.6
Trim60Q8VI40 Gm13422-201ENSMUST00000118834 504 ntBASIC11.28□□□□□ -0.6
Trim60Q8VI40 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim60Q8VI40 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim60Q8VI40 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.28□□□□□ -0.6
Trim60Q8VI40 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim60Q8VI40 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms