Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Hyal2-206ENSMUST00000195681 2968 ntBASIC10.32□□□□□ -0.76
Clrn1Q8K445 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC10.32□□□□□ -0.76
Clrn1Q8K445 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Clrn1Q8K445 AC122876.1-201ENSMUST00000217619 825 ntBASIC10.32□□□□□ -0.76
Clrn1Q8K445 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC10.32□□□□□ -0.76
Clrn1Q8K445 AC136376.2-201ENSMUST00000228819 490 ntBASIC10.32□□□□□ -0.76
Clrn1Q8K445 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Gm25125-201ENSMUST00000083340 136 ntBASIC10.32□□□□□ -0.76
Clrn1Q8K445 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Clrn1Q8K445 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Gm12274-201ENSMUST00000120062 385 ntBASIC10.31□□□□□ -0.76
Clrn1Q8K445 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Clrn1Q8K445 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Platr10-202ENSMUST00000191479 818 ntBASIC10.31□□□□□ -0.76
Clrn1Q8K445 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC10.31□□□□□ -0.76
Clrn1Q8K445 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC10.31□□□□□ -0.76
Clrn1Q8K445 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Clrn1Q8K445 AC134248.1-201ENSMUST00000216113 1176 ntBASIC10.31□□□□□ -0.76
Clrn1Q8K445 Id2-203ENSMUST00000222667 958 ntBASIC10.31□□□□□ -0.76
Clrn1Q8K445 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Clrn1Q8K445 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Gm45165-201ENSMUST00000207763 1631 ntBASIC10.3□□□□□ -0.76
Clrn1Q8K445 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.3□□□□□ -0.76
Clrn1Q8K445 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms