Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Gm37003-201ENSMUST00000194702 2827 ntBASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Nit1-201ENSMUST00000111289 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Gm8302-201ENSMUST00000119217 852 ntBASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Gm16219-201ENSMUST00000120096 274 ntBASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Gm25492-201ENSMUST00000157383 129 ntBASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Gm6397-201ENSMUST00000161973 1069 ntBASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Gm2260-201ENSMUST00000184965 657 ntBASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Gm5369-201ENSMUST00000217499 588 ntBASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Gm5186-201ENSMUST00000218781 920 ntBASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 CT573034.1-201ENSMUST00000222983 313 ntBASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 AC166344.1-201ENSMUST00000223745 674 ntBASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 CT025694.1-201ENSMUST00000226188 934 ntBASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Tmem74bos-202ENSMUST00000149319 2090 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Gm18198-201ENSMUST00000204986 1551 ntBASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Gpm6b-204ENSMUST00000112226 3174 ntAPPRIS ALT1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Aqp7-202ENSMUST00000054945 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nhlrc3Q8CCH2 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Rd3-202ENSMUST00000180463 3724 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Pex2-203ENSMUST00000164828 2051 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Rasal1-205ENSMUST00000156722 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Gm28138-201ENSMUST00000186250 2167 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Gm29270-201ENSMUST00000188071 2167 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Gm29392-201ENSMUST00000189429 2167 ntTSL 5 BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Gm29252-201ENSMUST00000189869 2167 ntTSL 5 BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Gm29305-201ENSMUST00000191054 2167 ntTSL 5 BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Gm37981-201ENSMUST00000194280 535 ntBASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Gm43852-201ENSMUST00000202098 917 ntBASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Gm7551-201ENSMUST00000089593 1074 ntBASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Ces1f-201ENSMUST00000034178 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC9.22□□□□□ -0.93
Nhlrc3Q8CCH2 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC9.22□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms