Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpp38Q80UU2 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpp38Q80UU2 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpp38Q80UU2 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpp38Q80UU2 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpp38Q80UU2 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpp38Q80UU2 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpp38Q80UU2 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpp38Q80UU2 Bcl2-202ENSMUST00000189999 2841 ntBASIC10.93□□□□□ -0.66
Rpp38Q80UU2 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpp38Q80UU2 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rpp38Q80UU2 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpp38Q80UU2 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpp38Q80UU2 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC10.93□□□□□ -0.66
Rpp38Q80UU2 Mir1901-201ENSMUST00000122616 78 ntBASIC10.93□□□□□ -0.66
Rpp38Q80UU2 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC10.93□□□□□ -0.66
Rpp38Q80UU2 Gm16030-201ENSMUST00000159098 603 ntBASIC10.93□□□□□ -0.66
Rpp38Q80UU2 Gm5100-201ENSMUST00000195631 589 ntBASIC10.93□□□□□ -0.66
Rpp38Q80UU2 Gm42518-201ENSMUST00000196277 938 ntBASIC10.93□□□□□ -0.66
Rpp38Q80UU2 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rpp38Q80UU2 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC10.93□□□□□ -0.66
Rpp38Q80UU2 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rpp38Q80UU2 CT030166.5-201ENSMUST00000222249 420 ntBASIC10.93□□□□□ -0.66
Rpp38Q80UU2 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpp38Q80UU2 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpp38Q80UU2 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpp38Q80UU2 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpp38Q80UU2 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpp38Q80UU2 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Rpp38Q80UU2 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpp38Q80UU2 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rpp38Q80UU2 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpp38Q80UU2 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rpp38Q80UU2 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpp38Q80UU2 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpp38Q80UU2 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rpp38Q80UU2 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.93□□□□□ -0.66
Rpp38Q80UU2 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpp38Q80UU2 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpp38Q80UU2 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Gm37058-201ENSMUST00000193393 1644 ntBASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Gm11380-201ENSMUST00000118067 560 ntBASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Gm9081-201ENSMUST00000182346 991 ntBASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Gm43097-201ENSMUST00000196867 151 ntBASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Gm42655-201ENSMUST00000202782 1134 ntBASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Gm3726-201ENSMUST00000203110 785 ntBASIC10.92□□□□□ -0.66
Rpp38Q80UU2 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rpp38Q80UU2 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpp38Q80UU2 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpp38Q80UU2 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpp38Q80UU2 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpp38Q80UU2 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpp38Q80UU2 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpp38Q80UU2 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpp38Q80UU2 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rpp38Q80UU2 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms