Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Smarcd3Q6P9Z1 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Smarcd3Q6P9Z1 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Smarcd3Q6P9Z1 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Smarcd3Q6P9Z1 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Smarcd3Q6P9Z1 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 Gm14592-201ENSMUST00000117201 560 ntBASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 Gm18367-201ENSMUST00000176139 600 ntBASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 Gm37246-201ENSMUST00000192665 835 ntBASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 Gm37835-201ENSMUST00000193305 361 ntBASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 Gm9111-201ENSMUST00000219394 709 ntBASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 CT030170.2-201ENSMUST00000223267 126 ntBASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 Gm45675-201ENSMUST00000211202 3429 ntBASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Smarcd3Q6P9Z1 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Spats2l-206ENSMUST00000167085 3929 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 n-R5s64-201ENSMUST00000102019 119 ntBASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Gm24992-201ENSMUST00000157412 130 ntBASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Abhd11os-203ENSMUST00000222613 363 ntBASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Gm1821-202ENSMUST00000227415 750 ntBASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Mettl6-204ENSMUST00000227595 1027 ntBASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Gm45161-201ENSMUST00000207316 2263 ntBASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
Smarcd3Q6P9Z1 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Smarcd3Q6P9Z1 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC10□□□□□ -0.81
Smarcd3Q6P9Z1 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Smarcd3Q6P9Z1 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC10□□□□□ -0.81
Smarcd3Q6P9Z1 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Smarcd3Q6P9Z1 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Smarcd3Q6P9Z1 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC10□□□□□ -0.81
Smarcd3Q6P9Z1 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC10□□□□□ -0.81
Smarcd3Q6P9Z1 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Smarcd3Q6P9Z1 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Smarcd3Q6P9Z1 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC10□□□□□ -0.81
Smarcd3Q6P9Z1 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms