Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm28624-201ENSMUST00000186430 2131 ntBASIC12.22□□□□□ -0.45
Usp49Q6P9L4 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Usp49Q6P9L4 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp49Q6P9L4 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC12.22□□□□□ -0.45
Usp49Q6P9L4 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp49Q6P9L4 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Usp49Q6P9L4 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Usp49Q6P9L4 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp49Q6P9L4 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC12.22□□□□□ -0.45
Usp49Q6P9L4 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp49Q6P9L4 Gm23061-201ENSMUST00000102348 116 ntBASIC12.22□□□□□ -0.45
Usp49Q6P9L4 Gm14892-201ENSMUST00000117636 267 ntBASIC12.22□□□□□ -0.45
Usp49Q6P9L4 Gm12389-201ENSMUST00000117696 418 ntBASIC12.22□□□□□ -0.45
Usp49Q6P9L4 Gm13937-201ENSMUST00000121000 988 ntBASIC12.22□□□□□ -0.45
Usp49Q6P9L4 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp49Q6P9L4 Gm24398-201ENSMUST00000157870 109 ntBASIC12.22□□□□□ -0.45
Usp49Q6P9L4 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
Usp49Q6P9L4 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC12.22□□□□□ -0.45
Usp49Q6P9L4 Gm43671-201ENSMUST00000200422 433 ntBASIC12.22□□□□□ -0.45
Usp49Q6P9L4 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Usp49Q6P9L4 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Usp49Q6P9L4 AC153152.3-201ENSMUST00000222188 1135 ntBASIC12.22□□□□□ -0.45
Usp49Q6P9L4 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp49Q6P9L4 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC12.22□□□□□ -0.45
Usp49Q6P9L4 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp49Q6P9L4 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp49Q6P9L4 Gm18294-201ENSMUST00000176980 1748 ntBASIC12.22□□□□□ -0.45
Usp49Q6P9L4 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Usp49Q6P9L4 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp49Q6P9L4 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Usp49Q6P9L4 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Usp49Q6P9L4 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp49Q6P9L4 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Usp49Q6P9L4 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp49Q6P9L4 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Usp49Q6P9L4 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Usp49Q6P9L4 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Usp49Q6P9L4 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp49Q6P9L4 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp49Q6P9L4 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Usp49Q6P9L4 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Usp49Q6P9L4 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Usp49Q6P9L4 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.21□□□□□ -0.45
Usp49Q6P9L4 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Usp49Q6P9L4 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp49Q6P9L4 Gm13104-201ENSMUST00000119651 1446 ntBASIC12.21□□□□□ -0.45
Usp49Q6P9L4 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Usp49Q6P9L4 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC12.21□□□□□ -0.45
Usp49Q6P9L4 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Usp49Q6P9L4 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Usp49Q6P9L4 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Usp49Q6P9L4 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC12.21□□□□□ -0.45
Usp49Q6P9L4 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Usp49Q6P9L4 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp49Q6P9L4 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Usp49Q6P9L4 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Usp49Q6P9L4 Gm26013-201ENSMUST00000104404 119 ntBASIC12.21□□□□□ -0.45
Usp49Q6P9L4 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.21□□□□□ -0.45
Usp49Q6P9L4 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Usp49Q6P9L4 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Usp49Q6P9L4 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Usp49Q6P9L4 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Usp49Q6P9L4 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.21□□□□□ -0.45
Usp49Q6P9L4 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.21□□□□□ -0.45
Usp49Q6P9L4 Gm37597-201ENSMUST00000191853 382 ntBASIC12.21□□□□□ -0.45
Usp49Q6P9L4 Gm42816-201ENSMUST00000198433 325 ntBASIC12.21□□□□□ -0.45
Usp49Q6P9L4 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp49Q6P9L4 Gm4811-201ENSMUST00000220879 1220 ntBASIC12.21□□□□□ -0.45
Usp49Q6P9L4 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC12.21□□□□□ -0.45
Usp49Q6P9L4 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Usp49Q6P9L4 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp49Q6P9L4 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Usp49Q6P9L4 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp49Q6P9L4 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Usp49Q6P9L4 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Usp49Q6P9L4 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Usp49Q6P9L4 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.21□□□□□ -0.46
Usp49Q6P9L4 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.21□□□□□ -0.46
Usp49Q6P9L4 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Usp49Q6P9L4 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.21□□□□□ -0.46
Usp49Q6P9L4 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Usp49Q6P9L4 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp49Q6P9L4 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Usp49Q6P9L4 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp49Q6P9L4 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp49Q6P9L4 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp49Q6P9L4 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp49Q6P9L4 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp49Q6P9L4 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.2□□□□□ -0.46
Usp49Q6P9L4 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp49Q6P9L4 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.2□□□□□ -0.46
Usp49Q6P9L4 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usp49Q6P9L4 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp49Q6P9L4 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Usp49Q6P9L4 Gm5244-201ENSMUST00000164001 339 ntBASIC12.2□□□□□ -0.46
Usp49Q6P9L4 Gm6407-201ENSMUST00000176468 549 ntBASIC12.2□□□□□ -0.46
Usp49Q6P9L4 Gm7525-201ENSMUST00000219425 454 ntBASIC12.2□□□□□ -0.46
Usp49Q6P9L4 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC12.2□□□□□ -0.46
Usp49Q6P9L4 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Usp49Q6P9L4 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms