Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC14.04□□□□□ -0.16
Clcn1Q64347 Gm45416-201ENSMUST00000209713 2201 ntBASIC14.04□□□□□ -0.16
Clcn1Q64347 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn1Q64347 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn1Q64347 Gm43167-201ENSMUST00000202001 1606 ntBASIC14.04□□□□□ -0.16
Clcn1Q64347 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn1Q64347 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
Clcn1Q64347 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Clcn1Q64347 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Clcn1Q64347 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn1Q64347 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn1Q64347 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn1Q64347 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn1Q64347 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn1Q64347 Gm43963-201ENSMUST00000203466 2488 ntBASIC14.03□□□□□ -0.16
Clcn1Q64347 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn1Q64347 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC14.03□□□□□ -0.16
Clcn1Q64347 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn1Q64347 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Clcn1Q64347 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn1Q64347 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn1Q64347 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn1Q64347 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn1Q64347 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Clcn1Q64347 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
Clcn1Q64347 Gm16459-201ENSMUST00000121443 686 ntBASIC14.03□□□□□ -0.16
Clcn1Q64347 Mir432-201ENSMUST00000157230 75 ntBASIC14.03□□□□□ -0.16
Clcn1Q64347 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC14.03□□□□□ -0.16
Clcn1Q64347 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn1Q64347 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC14.03□□□□□ -0.16
Clcn1Q64347 Gm18733-202ENSMUST00000174447 401 ntBASIC14.03□□□□□ -0.16
Clcn1Q64347 n-R5s130-201ENSMUST00000178128 119 ntBASIC14.03□□□□□ -0.16
Clcn1Q64347 Gm24312-201ENSMUST00000178677 119 ntBASIC14.03□□□□□ -0.16
Clcn1Q64347 n-R5s106-201ENSMUST00000179060 119 ntBASIC14.03□□□□□ -0.16
Clcn1Q64347 n-R5s118-201ENSMUST00000179887 119 ntBASIC14.03□□□□□ -0.16
Clcn1Q64347 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC14.03□□□□□ -0.16
Clcn1Q64347 Gm43316-201ENSMUST00000197252 1295 ntBASIC14.03□□□□□ -0.16
Clcn1Q64347 Gm42751-201ENSMUST00000198065 559 ntBASIC14.03□□□□□ -0.16
Clcn1Q64347 Gm43460-201ENSMUST00000202491 1057 ntBASIC14.03□□□□□ -0.16
Clcn1Q64347 Gm7238-201ENSMUST00000206467 973 ntBASIC14.03□□□□□ -0.16
Clcn1Q64347 Gm7192-201ENSMUST00000210793 1137 ntBASIC14.03□□□□□ -0.16
Clcn1Q64347 Gm26782-203ENSMUST00000227103 751 ntBASIC14.03□□□□□ -0.16
Clcn1Q64347 AC121567.1-201ENSMUST00000227213 842 ntBASIC14.03□□□□□ -0.16
Clcn1Q64347 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC14.03□□□□□ -0.16
Clcn1Q64347 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn1Q64347 Gm12912-201ENSMUST00000121596 1381 ntBASIC14.03□□□□□ -0.16
Clcn1Q64347 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn1Q64347 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Clcn1Q64347 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC14.03□□□□□ -0.16
Clcn1Q64347 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn1Q64347 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC14.03□□□□□ -0.16
Clcn1Q64347 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn1Q64347 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn1Q64347 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn1Q64347 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Clcn1Q64347 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn1Q64347 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn1Q64347 AC154314.2-201ENSMUST00000223677 3502 ntBASIC14.03□□□□□ -0.16
Clcn1Q64347 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clcn1Q64347 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Clcn1Q64347 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clcn1Q64347 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Clcn1Q64347 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clcn1Q64347 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Clcn1Q64347 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Clcn1Q64347 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clcn1Q64347 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clcn1Q64347 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Clcn1Q64347 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Clcn1Q64347 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clcn1Q64347 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clcn1Q64347 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Clcn1Q64347 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC14.02□□□□□ -0.16
Clcn1Q64347 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clcn1Q64347 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Clcn1Q64347 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clcn1Q64347 AC155245.1-201ENSMUST00000222266 1804 ntBASIC14.02□□□□□ -0.16
Clcn1Q64347 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC14.02□□□□□ -0.16
Clcn1Q64347 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clcn1Q64347 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC14.02□□□□□ -0.16
Clcn1Q64347 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Clcn1Q64347 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Clcn1Q64347 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC14.02□□□□□ -0.17
Clcn1Q64347 Gm13827-201ENSMUST00000148801 372 ntBASIC14.02□□□□□ -0.17
Clcn1Q64347 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Clcn1Q64347 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Clcn1Q64347 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC14.02□□□□□ -0.17
Clcn1Q64347 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC14.02□□□□□ -0.17
Clcn1Q64347 Ighv5-8-202ENSMUST00000191967 337 ntBASIC14.02□□□□□ -0.17
Clcn1Q64347 Gm44683-201ENSMUST00000209088 484 ntBASIC14.02□□□□□ -0.17
Clcn1Q64347 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Clcn1Q64347 CT025689.1-201ENSMUST00000225214 283 ntBASIC14.02□□□□□ -0.17
Clcn1Q64347 CT025618.1-203ENSMUST00000227008 589 ntBASIC14.02□□□□□ -0.17
Clcn1Q64347 AC164099.1-201ENSMUST00000227780 333 ntBASIC14.02□□□□□ -0.17
Clcn1Q64347 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clcn1Q64347 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Clcn1Q64347 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Clcn1Q64347 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clcn1Q64347 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clcn1Q64347 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms