Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm13204-201ENSMUST00000120110 821 ntBASIC14.11□□□□□ -0.15
Trim28Q62318 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC14.11□□□□□ -0.15
Trim28Q62318 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim28Q62318 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim28Q62318 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC14.11□□□□□ -0.15
Trim28Q62318 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim28Q62318 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim28Q62318 Gm9619-201ENSMUST00000211587 762 ntBASIC14.11□□□□□ -0.15
Trim28Q62318 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim28Q62318 Olfr692-202ENSMUST00000217827 1126 ntBASIC14.11□□□□□ -0.15
Trim28Q62318 AC154431.1-201ENSMUST00000224910 880 ntBASIC14.11□□□□□ -0.15
Trim28Q62318 CT030652.1-201ENSMUST00000227377 1235 ntBASIC14.11□□□□□ -0.15
Trim28Q62318 AC164099.1-201ENSMUST00000227780 333 ntBASIC14.11□□□□□ -0.15
Trim28Q62318 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trim28Q62318 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim28Q62318 Gm43417-201ENSMUST00000201586 5207 ntBASIC14.11□□□□□ -0.15
Trim28Q62318 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim28Q62318 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim28Q62318 Gm45675-201ENSMUST00000211202 3429 ntBASIC14.11□□□□□ -0.15
Trim28Q62318 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim28Q62318 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Trim28Q62318 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim28Q62318 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim28Q62318 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim28Q62318 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim28Q62318 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim28Q62318 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Trim28Q62318 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim28Q62318 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trim28Q62318 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trim28Q62318 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim28Q62318 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Trim28Q62318 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim28Q62318 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim28Q62318 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC14.1□□□□□ -0.15
Trim28Q62318 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim28Q62318 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim28Q62318 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim28Q62318 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim28Q62318 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim28Q62318 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Trim28Q62318 Gm12097-201ENSMUST00000121523 1414 ntBASIC14.1□□□□□ -0.15
Trim28Q62318 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim28Q62318 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trim28Q62318 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC14.1□□□□□ -0.15
Trim28Q62318 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Trim28Q62318 Gm15554-201ENSMUST00000120406 913 ntBASIC14.1□□□□□ -0.15
Trim28Q62318 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC14.1□□□□□ -0.15
Trim28Q62318 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC14.1□□□□□ -0.15
Trim28Q62318 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC14.1□□□□□ -0.15
Trim28Q62318 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Trim28Q62318 Gm6686-201ENSMUST00000178455 258 ntBASIC14.1□□□□□ -0.15
Trim28Q62318 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC14.1□□□□□ -0.15
Trim28Q62318 Gm6331-201ENSMUST00000217890 450 ntBASIC14.1□□□□□ -0.15
Trim28Q62318 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC14.1□□□□□ -0.15
Trim28Q62318 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trim28Q62318 Gm6564-201ENSMUST00000075377 619 ntBASIC14.1□□□□□ -0.15
Trim28Q62318 Gm10238-201ENSMUST00000089689 408 ntBASIC14.1□□□□□ -0.15
Trim28Q62318 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim28Q62318 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim28Q62318 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim28Q62318 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim28Q62318 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC14.1□□□□□ -0.15
Trim28Q62318 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC14.1□□□□□ -0.15
Trim28Q62318 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim28Q62318 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim28Q62318 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim28Q62318 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC14.1□□□□□ -0.15
Trim28Q62318 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim28Q62318 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trim28Q62318 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim28Q62318 Gm42971-201ENSMUST00000199228 2079 ntBASIC14.1□□□□□ -0.15
Trim28Q62318 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Trim28Q62318 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC14.1□□□□□ -0.15
Trim28Q62318 Gm38344-201ENSMUST00000195306 1353 ntBASIC14.09□□□□□ -0.15
Trim28Q62318 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim28Q62318 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim28Q62318 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim28Q62318 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim28Q62318 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim28Q62318 Gm12418-201ENSMUST00000118116 942 ntBASIC14.09□□□□□ -0.15
Trim28Q62318 Gm8019-201ENSMUST00000119317 587 ntBASIC14.09□□□□□ -0.15
Trim28Q62318 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC14.09□□□□□ -0.15
Trim28Q62318 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC14.09□□□□□ -0.15
Trim28Q62318 Gm15258-201ENSMUST00000153801 741 ntBASIC14.09□□□□□ -0.15
Trim28Q62318 Gm25998-201ENSMUST00000175397 53 ntBASIC14.09□□□□□ -0.15
Trim28Q62318 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC14.09□□□□□ -0.15
Trim28Q62318 Gm5254-201ENSMUST00000188353 977 ntBASIC14.09□□□□□ -0.15
Trim28Q62318 Gm8384-201ENSMUST00000190905 704 ntBASIC14.09□□□□□ -0.15
Trim28Q62318 Gm38038-201ENSMUST00000193803 259 ntBASIC14.09□□□□□ -0.15
Trim28Q62318 Gm4430-202ENSMUST00000193902 1041 ntBASIC14.09□□□□□ -0.15
Trim28Q62318 Gm38349-201ENSMUST00000195732 462 ntBASIC14.09□□□□□ -0.15
Trim28Q62318 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim28Q62318 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Trim28Q62318 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC14.09□□□□□ -0.15
Trim28Q62318 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim28Q62318 AC101205.2-201ENSMUST00000226206 715 ntBASIC14.09□□□□□ -0.15
Trim28Q62318 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Trim28Q62318 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim28Q62318 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms