Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ift88Q61371 AC122382.1-201ENSMUST00000225869 2371 ntBASIC12.07□□□□□ -0.48
Ift88Q61371 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ift88Q61371 Gm28624-201ENSMUST00000186430 2131 ntBASIC12.07□□□□□ -0.48
Ift88Q61371 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ift88Q61371 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ift88Q61371 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ift88Q61371 Nln-205ENSMUST00000224945 2486 ntBASIC12.06□□□□□ -0.48
Ift88Q61371 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ift88Q61371 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ift88Q61371 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ift88Q61371 AC124433.1-202ENSMUST00000224762 1535 ntBASIC12.06□□□□□ -0.48
Ift88Q61371 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ift88Q61371 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.06□□□□□ -0.48
Ift88Q61371 Gm10829-201ENSMUST00000202084 2988 ntBASIC12.06□□□□□ -0.48
Ift88Q61371 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ift88Q61371 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ift88Q61371 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Ift88Q61371 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ift88Q61371 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ift88Q61371 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ift88Q61371 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ift88Q61371 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ift88Q61371 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ift88Q61371 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ift88Q61371 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ift88Q61371 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ift88Q61371 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ift88Q61371 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.06□□□□□ -0.48
Ift88Q61371 Gm9133-201ENSMUST00000118289 540 ntBASIC12.06□□□□□ -0.48
Ift88Q61371 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ift88Q61371 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ift88Q61371 Mipep-ps-201ENSMUST00000177439 291 ntBASIC12.06□□□□□ -0.48
Ift88Q61371 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ift88Q61371 Gm4753-201ENSMUST00000188327 1255 ntBASIC12.06□□□□□ -0.48
Ift88Q61371 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.06□□□□□ -0.48
Ift88Q61371 Gm44323-201ENSMUST00000198689 129 ntBASIC12.06□□□□□ -0.48
Ift88Q61371 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.06□□□□□ -0.48
Ift88Q61371 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ift88Q61371 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ift88Q61371 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ift88Q61371 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ift88Q61371 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ift88Q61371 Gm10463-202ENSMUST00000195772 2889 ntBASIC12.06□□□□□ -0.48
Ift88Q61371 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ift88Q61371 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ift88Q61371 Gm44103-201ENSMUST00000204364 3662 ntBASIC12.06□□□□□ -0.48
Ift88Q61371 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ift88Q61371 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ift88Q61371 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ift88Q61371 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ift88Q61371 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC12.05□□□□□ -0.48
Ift88Q61371 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ift88Q61371 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ift88Q61371 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ift88Q61371 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ift88Q61371 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ift88Q61371 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ift88Q61371 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ift88Q61371 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ift88Q61371 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ift88Q61371 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ift88Q61371 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ift88Q61371 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC12.05□□□□□ -0.48
Ift88Q61371 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ift88Q61371 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Ift88Q61371 Gm7857-201ENSMUST00000117957 358 ntBASIC12.05□□□□□ -0.48
Ift88Q61371 Gm11956-201ENSMUST00000119525 512 ntBASIC12.05□□□□□ -0.48
Ift88Q61371 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.05□□□□□ -0.48
Ift88Q61371 Gm23699-201ENSMUST00000158835 135 ntBASIC12.05□□□□□ -0.48
Ift88Q61371 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ift88Q61371 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ift88Q61371 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ift88Q61371 Gm30946-201ENSMUST00000198288 724 ntBASIC12.05□□□□□ -0.48
Ift88Q61371 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ift88Q61371 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ift88Q61371 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ift88Q61371 Gm18042-201ENSMUST00000219887 790 ntBASIC12.05□□□□□ -0.48
Ift88Q61371 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.05□□□□□ -0.48
Ift88Q61371 AC154589.2-201ENSMUST00000228847 251 ntBASIC12.05□□□□□ -0.48
Ift88Q61371 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC12.05□□□□□ -0.48
Ift88Q61371 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ift88Q61371 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ift88Q61371 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ift88Q61371 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ift88Q61371 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ift88Q61371 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ift88Q61371 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
Ift88Q61371 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC12.05□□□□□ -0.48
Ift88Q61371 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ift88Q61371 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ift88Q61371 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ift88Q61371 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ift88Q61371 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ift88Q61371 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC12.05□□□□□ -0.48
Ift88Q61371 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ift88Q61371 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ift88Q61371 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ift88Q61371 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ift88Q61371 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms