Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm37264-201ENSMUST00000194916 2192 ntBASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Rgr-203ENSMUST00000225070 4704 ntBASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Gfra2-203ENSMUST00000227697 1323 ntBASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Gm23612-201ENSMUST00000103823 110 ntBASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Gm18733-202ENSMUST00000174447 401 ntBASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Mipep-ps-201ENSMUST00000177439 291 ntBASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Gm23576-201ENSMUST00000179918 110 ntBASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Gm28925-201ENSMUST00000188586 168 ntBASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Gm5302-201ENSMUST00000202130 796 ntBASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Gm44683-201ENSMUST00000209088 484 ntBASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Gm18499-201ENSMUST00000220808 1021 ntBASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Gm44740-201ENSMUST00000205603 1614 ntBASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rc3h1Q4VGL6 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 AC124732.3-201ENSMUST00000221835 1765 ntBASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Gm8872-201ENSMUST00000197475 1341 ntBASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Ighv13-1-201ENSMUST00000103480 294 ntBASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Gm5257-201ENSMUST00000121823 790 ntBASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Gm26272-201ENSMUST00000179241 132 ntBASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Gm28032-201ENSMUST00000184104 96 ntBASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Gm17790-201ENSMUST00000191545 1228 ntBASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Gm43969-201ENSMUST00000204833 535 ntBASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Gm44605-201ENSMUST00000206892 949 ntBASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rc3h1Q4VGL6 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Rc3h1Q4VGL6 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.71□□□□□ -0.38
Rc3h1Q4VGL6 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rc3h1Q4VGL6 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rc3h1Q4VGL6 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.71□□□□□ -0.38
Rc3h1Q4VGL6 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rc3h1Q4VGL6 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms