Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28047Q3US59 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.43□□□□□ -0.42
Gm28047Q3US59 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Gm28047Q3US59 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Gm28047Q3US59 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28047Q3US59 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm28047Q3US59 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28047Q3US59 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28047Q3US59 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28047Q3US59 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28047Q3US59 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC12.42□□□□□ -0.42
Gm28047Q3US59 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC12.42□□□□□ -0.42
Gm28047Q3US59 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28047Q3US59 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28047Q3US59 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28047Q3US59 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
Gm28047Q3US59 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28047Q3US59 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC12.42□□□□□ -0.42
Gm28047Q3US59 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Gm28047Q3US59 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.42□□□□□ -0.42
Gm28047Q3US59 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28047Q3US59 Gm37697-201ENSMUST00000195680 1844 ntBASIC12.42□□□□□ -0.42
Gm28047Q3US59 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Gm28047Q3US59 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28047Q3US59 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Gm28047Q3US59 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC12.42□□□□□ -0.42
Gm28047Q3US59 Gm11952-201ENSMUST00000121172 821 ntBASIC12.42□□□□□ -0.42
Gm28047Q3US59 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28047Q3US59 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Gm28047Q3US59 Gm23771-201ENSMUST00000178702 110 ntBASIC12.42□□□□□ -0.42
Gm28047Q3US59 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.42□□□□□ -0.42
Gm28047Q3US59 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Gm28047Q3US59 Gm6677-201ENSMUST00000195100 441 ntBASIC12.42□□□□□ -0.42
Gm28047Q3US59 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Gm28047Q3US59 Gm43520-201ENSMUST00000197996 164 ntBASIC12.42□□□□□ -0.42
Gm28047Q3US59 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.42□□□□□ -0.42
Gm28047Q3US59 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28047Q3US59 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28047Q3US59 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28047Q3US59 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Gm28047Q3US59 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Gm28047Q3US59 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28047Q3US59 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Gm28047Q3US59 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28047Q3US59 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28047Q3US59 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28047Q3US59 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC12.42□□□□□ -0.42
Gm28047Q3US59 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28047Q3US59 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Gm28047Q3US59 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28047Q3US59 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Gm28047Q3US59 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm28047Q3US59 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Gm28047Q3US59 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28047Q3US59 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28047Q3US59 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Gm28047Q3US59 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Gm28047Q3US59 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Gm28047Q3US59 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28047Q3US59 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28047Q3US59 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28047Q3US59 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28047Q3US59 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28047Q3US59 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28047Q3US59 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28047Q3US59 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC12.41□□□□□ -0.42
Gm28047Q3US59 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.41□□□□□ -0.42
Gm28047Q3US59 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28047Q3US59 Gm12194-201ENSMUST00000117756 1012 ntBASIC12.41□□□□□ -0.42
Gm28047Q3US59 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28047Q3US59 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28047Q3US59 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28047Q3US59 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC12.41□□□□□ -0.42
Gm28047Q3US59 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28047Q3US59 Gm25554-201ENSMUST00000158075 113 ntBASIC12.41□□□□□ -0.42
Gm28047Q3US59 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28047Q3US59 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28047Q3US59 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28047Q3US59 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28047Q3US59 Gm4895-201ENSMUST00000181646 1137 ntBASIC12.41□□□□□ -0.42
Gm28047Q3US59 Gm27910-201ENSMUST00000185004 107 ntBASIC12.41□□□□□ -0.42
Gm28047Q3US59 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Gm28047Q3US59 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28047Q3US59 Gm37102-201ENSMUST00000195740 1105 ntBASIC12.41□□□□□ -0.42
Gm28047Q3US59 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC12.41□□□□□ -0.42
Gm28047Q3US59 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28047Q3US59 Gm44100-201ENSMUST00000204329 436 ntBASIC12.41□□□□□ -0.42
Gm28047Q3US59 Gm32390-201ENSMUST00000212713 1172 ntBASIC12.41□□□□□ -0.42
Gm28047Q3US59 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28047Q3US59 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Gm28047Q3US59 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.41□□□□□ -0.42
Gm28047Q3US59 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC12.41□□□□□ -0.42
Gm28047Q3US59 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28047Q3US59 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Gm28047Q3US59 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28047Q3US59 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28047Q3US59 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Gm28047Q3US59 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28047Q3US59 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm28047Q3US59 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms