Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Gm24161-201ENSMUST00000104592 130 ntBASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 Gm13547-202ENSMUST00000113810 629 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 Gm13758-201ENSMUST00000118699 743 ntBASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 Gm6517-201ENSMUST00000121056 511 ntBASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 Csta1-202ENSMUST00000161638 422 ntTSL 3 BASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 Gm25694-201ENSMUST00000175448 282 ntBASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 Gm5845-201ENSMUST00000195812 796 ntBASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 Gm42908-201ENSMUST00000197508 870 ntBASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 Gm9273-201ENSMUST00000200606 715 ntBASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 AC166061.1-201ENSMUST00000225163 1138 ntBASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 AC174647.1-201ENSMUST00000227419 1271 ntBASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 2700038G22Rik-201ENSMUST00000181574 1375 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b2Q3UJB0 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC14.16□□□□□ -0.14
Sf3b2Q3UJB0 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b2Q3UJB0 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Sf3b2Q3UJB0 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b2Q3UJB0 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Sf3b2Q3UJB0 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b2Q3UJB0 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b2Q3UJB0 Banf2os-201ENSMUST00000124061 771 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b2Q3UJB0 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC14.16□□□□□ -0.14
Sf3b2Q3UJB0 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b2Q3UJB0 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC14.16□□□□□ -0.14
Sf3b2Q3UJB0 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC14.16□□□□□ -0.14
Sf3b2Q3UJB0 Tead1-211ENSMUST00000170352 1218 ntTSL 5 BASIC14.16□□□□□ -0.14
Sf3b2Q3UJB0 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC14.16□□□□□ -0.14
Sf3b2Q3UJB0 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC14.16□□□□□ -0.14
Sf3b2Q3UJB0 Gm18862-201ENSMUST00000204643 933 ntBASIC14.16□□□□□ -0.14
Sf3b2Q3UJB0 Gm5191-201ENSMUST00000222882 1236 ntBASIC14.16□□□□□ -0.14
Sf3b2Q3UJB0 AC123061.1-201ENSMUST00000228021 999 ntBASIC14.16□□□□□ -0.14
Sf3b2Q3UJB0 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b2Q3UJB0 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Sf3b2Q3UJB0 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b2Q3UJB0 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b2Q3UJB0 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b2Q3UJB0 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b2Q3UJB0 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b2Q3UJB0 Hat1-201ENSMUST00000028408 1576 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b2Q3UJB0 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Sf3b2Q3UJB0 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b2Q3UJB0 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b2Q3UJB0 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b2Q3UJB0 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b2Q3UJB0 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sf3b2Q3UJB0 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Sf3b2Q3UJB0 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Sf3b2Q3UJB0 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Sf3b2Q3UJB0 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 Gm43972-201ENSMUST00000181398 1467 ntBASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 Gm42815-201ENSMUST00000198787 1470 ntBASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 Fthl17b-201ENSMUST00000105006 842 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 Lyrm1-204ENSMUST00000106518 875 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 Gm22669-201ENSMUST00000158723 318 ntBASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 Gm6946-201ENSMUST00000182237 987 ntBASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 Gm45484-201ENSMUST00000210310 1141 ntBASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 Phf5a-201ENSMUST00000023117 864 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 Erich3-203ENSMUST00000189969 3460 ntBASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 AC155245.1-201ENSMUST00000222266 1804 ntBASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sf3b2Q3UJB0 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 121.4 ms