Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Cep95-202ENSMUST00000103068 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Il18bp-202ENSMUST00000209368 2596 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Ttc39c-204ENSMUST00000169401 1950 ntAPPRIS ALT1 TSL 5 BASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Gm46339-201ENSMUST00000222720 3539 ntBASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Atp4a-201ENSMUST00000005692 3485 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Gm6203-201ENSMUST00000209575 1342 ntBASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Gm10874-201ENSMUST00000100526 2355 ntTSL 2 BASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Gm17376-201ENSMUST00000166016 84 ntBASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Rn7s1-201ENSMUST00000174924 300 ntBASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Rn7s2-201ENSMUST00000175032 300 ntBASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Gm26461-201ENSMUST00000175064 290 ntBASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Gm18558-201ENSMUST00000186253 1214 ntBASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Tyms-ps-201ENSMUST00000219550 915 ntBASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Acer2-202ENSMUST00000084433 4060 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Fblim1-203ENSMUST00000105785 3091 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Patj-205ENSMUST00000107030 2104 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 CT025639.2-202ENSMUST00000225298 1630 ntBASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 4831440D22Rik-201ENSMUST00000211287 2929 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Tnfrsf9-204ENSMUST00000105672 1999 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccbe1Q3MI99 Ndst3-207ENSMUST00000172537 3152 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 AC153498.1-201ENSMUST00000219775 2722 ntBASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Kng2-202ENSMUST00000100046 2294 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Gm18626-201ENSMUST00000221512 1409 ntBASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Itga3-202ENSMUST00000107739 4636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Plat-201ENSMUST00000033941 2525 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Zfp60-208ENSMUST00000167955 2115 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 P4ha1-201ENSMUST00000009789 4043 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Vwce-201ENSMUST00000055115 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Tdp1-201ENSMUST00000021594 2019 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Gm12241-201ENSMUST00000118330 726 ntBASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Gm12749-201ENSMUST00000122138 1159 ntBASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Gm16570-201ENSMUST00000161951 436 ntBASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Mir3547-201ENSMUST00000175461 88 ntBASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Gm29396-201ENSMUST00000185659 716 ntBASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 AC132384.14-201ENSMUST00000219346 1147 ntBASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 CT573034.1-201ENSMUST00000222983 313 ntBASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Mir433-201ENSMUST00000093564 124 ntBASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Mill2-205ENSMUST00000227379 1998 ntAPPRIS ALT2 BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Platr9-202ENSMUST00000149572 1556 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Acad10-202ENSMUST00000111770 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Anks1b-210ENSMUST00000182113 3553 ntTSL 5 BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Hist4h4-201ENSMUST00000179285 2863 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Ccnt1-201ENSMUST00000012104 2175 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Gm28945-201ENSMUST00000187780 2165 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Gm29622-201ENSMUST00000190914 2165 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccbe1Q3MI99 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms