Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm8725-201ENSMUST00000221829 1333 ntBASIC13.73□□□□□ -0.21
Smarcc1P97496 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Smarcc1P97496 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Smarcc1P97496 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcc1P97496 Gm4775-201ENSMUST00000169588 402 ntBASIC13.73□□□□□ -0.21
Smarcc1P97496 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Smarcc1P97496 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcc1P97496 Gm17782-201ENSMUST00000174345 880 ntBASIC13.73□□□□□ -0.21
Smarcc1P97496 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Smarcc1P97496 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Smarcc1P97496 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Smarcc1P97496 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcc1P97496 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcc1P97496 Gm7539-201ENSMUST00000189789 630 ntBASIC13.73□□□□□ -0.21
Smarcc1P97496 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcc1P97496 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcc1P97496 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC13.73□□□□□ -0.21
Smarcc1P97496 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcc1P97496 Gm18042-201ENSMUST00000219887 790 ntBASIC13.73□□□□□ -0.21
Smarcc1P97496 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcc1P97496 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcc1P97496 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcc1P97496 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcc1P97496 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC13.73□□□□□ -0.21
Smarcc1P97496 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Smarcc1P97496 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcc1P97496 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.73□□□□□ -0.21
Smarcc1P97496 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcc1P97496 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcc1P97496 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Smarcc1P97496 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcc1P97496 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Smarcc1P97496 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcc1P97496 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcc1P97496 Gm13135-201ENSMUST00000117628 3121 ntBASIC13.73□□□□□ -0.21
Smarcc1P97496 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcc1P97496 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcc1P97496 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcc1P97496 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcc1P97496 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC13.72□□□□□ -0.21
Smarcc1P97496 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcc1P97496 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.72□□□□□ -0.21
Smarcc1P97496 AC164426.2-201ENSMUST00000225993 2492 ntBASIC13.72□□□□□ -0.21
Smarcc1P97496 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcc1P97496 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcc1P97496 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcc1P97496 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcc1P97496 Gm13624-201ENSMUST00000120263 462 ntBASIC13.72□□□□□ -0.21
Smarcc1P97496 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC13.72□□□□□ -0.21
Smarcc1P97496 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcc1P97496 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcc1P97496 Gm43097-201ENSMUST00000196867 151 ntBASIC13.72□□□□□ -0.21
Smarcc1P97496 Gm43117-201ENSMUST00000198531 379 ntBASIC13.72□□□□□ -0.21
Smarcc1P97496 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC13.72□□□□□ -0.21
Smarcc1P97496 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC13.72□□□□□ -0.21
Smarcc1P97496 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcc1P97496 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcc1P97496 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcc1P97496 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcc1P97496 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Smarcc1P97496 Gm5766-201ENSMUST00000160520 1977 ntBASIC13.72□□□□□ -0.21
Smarcc1P97496 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Smarcc1P97496 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcc1P97496 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcc1P97496 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcc1P97496 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.72□□□□□ -0.21
Smarcc1P97496 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Smarcc1P97496 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcc1P97496 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcc1P97496 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.72□□□□□ -0.21
Smarcc1P97496 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcc1P97496 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcc1P97496 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcc1P97496 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Smarcc1P97496 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcc1P97496 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcc1P97496 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcc1P97496 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcc1P97496 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcc1P97496 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcc1P97496 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcc1P97496 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcc1P97496 Gm8684-201ENSMUST00000195078 1564 ntBASIC13.71□□□□□ -0.21
Smarcc1P97496 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcc1P97496 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcc1P97496 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcc1P97496 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcc1P97496 AC154537.1-201ENSMUST00000226101 1304 ntBASIC13.71□□□□□ -0.21
Smarcc1P97496 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcc1P97496 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcc1P97496 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcc1P97496 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcc1P97496 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcc1P97496 Gm12136-201ENSMUST00000120460 1209 ntBASIC13.71□□□□□ -0.21
Smarcc1P97496 Gm6686-201ENSMUST00000178455 258 ntBASIC13.71□□□□□ -0.21
Smarcc1P97496 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcc1P97496 Gm26943-201ENSMUST00000182295 957 ntBASIC13.71□□□□□ -0.21
Smarcc1P97496 Gm6216-201ENSMUST00000182390 687 ntBASIC13.71□□□□□ -0.21
Smarcc1P97496 Gm4960-201ENSMUST00000182928 1001 ntBASIC13.71□□□□□ -0.21
Smarcc1P97496 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms