Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SgcbP82349 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
SgcbP82349 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC9.85□□□□□ -0.83
SgcbP82349 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
SgcbP82349 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
SgcbP82349 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC9.85□□□□□ -0.83
SgcbP82349 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SgcbP82349 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SgcbP82349 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
SgcbP82349 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SgcbP82349 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
SgcbP82349 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SgcbP82349 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SgcbP82349 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
SgcbP82349 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
SgcbP82349 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SgcbP82349 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
SgcbP82349 Gm19178-201ENSMUST00000217524 1819 ntBASIC9.85□□□□□ -0.83
SgcbP82349 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SgcbP82349 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
SgcbP82349 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SgcbP82349 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
SgcbP82349 Olfr362-201ENSMUST00000100144 954 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
SgcbP82349 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
SgcbP82349 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC9.85□□□□□ -0.83
SgcbP82349 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
SgcbP82349 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC9.85□□□□□ -0.83
SgcbP82349 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SgcbP82349 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC9.85□□□□□ -0.83
SgcbP82349 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SgcbP82349 Gm13284-201ENSMUST00000121020 547 ntBASIC9.85□□□□□ -0.83
SgcbP82349 Mir1901-201ENSMUST00000122616 78 ntBASIC9.85□□□□□ -0.83
SgcbP82349 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC9.85□□□□□ -0.83
SgcbP82349 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC9.85□□□□□ -0.83
SgcbP82349 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
SgcbP82349 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
SgcbP82349 Gm22993-201ENSMUST00000175423 254 ntBASIC9.85□□□□□ -0.83
SgcbP82349 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC9.85□□□□□ -0.83
SgcbP82349 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
SgcbP82349 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SgcbP82349 Gm8197-202ENSMUST00000193422 934 ntBASIC9.85□□□□□ -0.83
SgcbP82349 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC9.85□□□□□ -0.83
SgcbP82349 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
SgcbP82349 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC9.85□□□□□ -0.83
SgcbP82349 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
SgcbP82349 AC122346.3-201ENSMUST00000223983 306 ntBASIC9.85□□□□□ -0.83
SgcbP82349 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SgcbP82349 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SgcbP82349 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SgcbP82349 Rnf212-201ENSMUST00000068946 288 ntTSL 5 BASIC9.85□□□□□ -0.83
SgcbP82349 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
SgcbP82349 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
SgcbP82349 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SgcbP82349 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
SgcbP82349 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SgcbP82349 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
SgcbP82349 Gm42498-201ENSMUST00000199981 1372 ntBASIC9.85□□□□□ -0.83
SgcbP82349 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SgcbP82349 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC9.85□□□□□ -0.83
SgcbP82349 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SgcbP82349 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
SgcbP82349 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SgcbP82349 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SgcbP82349 Gm43972-201ENSMUST00000181398 1467 ntBASIC9.85□□□□□ -0.83
SgcbP82349 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
SgcbP82349 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
SgcbP82349 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
SgcbP82349 Gm43931-201ENSMUST00000204817 2870 ntBASIC9.85□□□□□ -0.83
SgcbP82349 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SgcbP82349 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SgcbP82349 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SgcbP82349 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SgcbP82349 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC9.84□□□□□ -0.83
SgcbP82349 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SgcbP82349 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SgcbP82349 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC9.84□□□□□ -0.83
SgcbP82349 Acbd5-212ENSMUST00000227663 4566 ntAPPRIS ALT2 BASIC9.84□□□□□ -0.83
SgcbP82349 AC130823.1-201ENSMUST00000228929 1549 ntBASIC9.84□□□□□ -0.83
SgcbP82349 Gm43660-201ENSMUST00000200956 6548 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SgcbP82349 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
SgcbP82349 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
SgcbP82349 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
SgcbP82349 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC9.84□□□□□ -0.83
SgcbP82349 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
SgcbP82349 Gm22379-201ENSMUST00000157480 131 ntBASIC9.84□□□□□ -0.83
SgcbP82349 Gm25554-201ENSMUST00000158075 113 ntBASIC9.84□□□□□ -0.83
SgcbP82349 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
SgcbP82349 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC9.84□□□□□ -0.83
SgcbP82349 Mir7032-201ENSMUST00000185154 79 ntBASIC9.84□□□□□ -0.83
SgcbP82349 Gm29410-201ENSMUST00000188383 694 ntBASIC9.84□□□□□ -0.83
SgcbP82349 Gm30946-201ENSMUST00000198288 724 ntBASIC9.84□□□□□ -0.83
SgcbP82349 Gm43667-201ENSMUST00000198616 1095 ntBASIC9.84□□□□□ -0.83
SgcbP82349 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC9.84□□□□□ -0.83
SgcbP82349 Gm42588-201ENSMUST00000200538 1297 ntBASIC9.84□□□□□ -0.83
SgcbP82349 Gm42655-201ENSMUST00000202782 1134 ntBASIC9.84□□□□□ -0.83
SgcbP82349 Gm44760-201ENSMUST00000206375 1173 ntBASIC9.84□□□□□ -0.83
SgcbP82349 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
SgcbP82349 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC9.84□□□□□ -0.83
SgcbP82349 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC9.84□□□□□ -0.83
SgcbP82349 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms