Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PrkcbP68404 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
PrkcbP68404 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
PrkcbP68404 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PrkcbP68404 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
PrkcbP68404 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PrkcbP68404 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
PrkcbP68404 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PrkcbP68404 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PrkcbP68404 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
PrkcbP68404 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.81□□□□□ -0.52
PrkcbP68404 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
PrkcbP68404 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
PrkcbP68404 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PrkcbP68404 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
PrkcbP68404 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
PrkcbP68404 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
PrkcbP68404 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
PrkcbP68404 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PrkcbP68404 Gm12783-201ENSMUST00000121425 397 ntBASIC11.81□□□□□ -0.52
PrkcbP68404 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC11.81□□□□□ -0.52
PrkcbP68404 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
PrkcbP68404 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
PrkcbP68404 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC11.81□□□□□ -0.52
PrkcbP68404 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC11.81□□□□□ -0.52
PrkcbP68404 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC11.81□□□□□ -0.52
PrkcbP68404 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC11.81□□□□□ -0.52
PrkcbP68404 Gm5700-201ENSMUST00000191483 989 ntBASIC11.81□□□□□ -0.52
PrkcbP68404 Gm43097-201ENSMUST00000196867 151 ntBASIC11.81□□□□□ -0.52
PrkcbP68404 Gm43969-201ENSMUST00000204833 535 ntBASIC11.81□□□□□ -0.52
PrkcbP68404 Gm8162-201ENSMUST00000213951 665 ntBASIC11.81□□□□□ -0.52
PrkcbP68404 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PrkcbP68404 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC11.81□□□□□ -0.52
PrkcbP68404 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PrkcbP68404 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC11.81□□□□□ -0.52
PrkcbP68404 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PrkcbP68404 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.81□□□□□ -0.52
PrkcbP68404 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PrkcbP68404 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
PrkcbP68404 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PrkcbP68404 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
PrkcbP68404 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC11.81□□□□□ -0.52
PrkcbP68404 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
PrkcbP68404 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
PrkcbP68404 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC11.8□□□□□ -0.52
PrkcbP68404 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PrkcbP68404 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PrkcbP68404 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PrkcbP68404 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
PrkcbP68404 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PrkcbP68404 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.8□□□□□ -0.52
PrkcbP68404 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.8□□□□□ -0.52
PrkcbP68404 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PrkcbP68404 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC11.8□□□□□ -0.52
PrkcbP68404 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
PrkcbP68404 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PrkcbP68404 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PrkcbP68404 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
PrkcbP68404 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
PrkcbP68404 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
PrkcbP68404 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PrkcbP68404 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PrkcbP68404 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.8□□□□□ -0.52
PrkcbP68404 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PrkcbP68404 Ighv13-1-201ENSMUST00000103480 294 ntBASIC11.8□□□□□ -0.52
PrkcbP68404 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
PrkcbP68404 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PrkcbP68404 Gm6758-201ENSMUST00000119643 1055 ntBASIC11.8□□□□□ -0.52
PrkcbP68404 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PrkcbP68404 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PrkcbP68404 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC11.8□□□□□ -0.52
PrkcbP68404 Gm18733-202ENSMUST00000174447 401 ntBASIC11.8□□□□□ -0.52
PrkcbP68404 Gm25951-201ENSMUST00000175330 64 ntBASIC11.8□□□□□ -0.52
PrkcbP68404 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PrkcbP68404 Gm7047-201ENSMUST00000196224 1063 ntBASIC11.8□□□□□ -0.52
PrkcbP68404 AC168279.1-201ENSMUST00000214611 382 ntBASIC11.8□□□□□ -0.52
PrkcbP68404 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC11.8□□□□□ -0.52
PrkcbP68404 CT010480.2-201ENSMUST00000225424 737 ntBASIC11.8□□□□□ -0.52
PrkcbP68404 AC154176.1-201ENSMUST00000225897 220 ntBASIC11.8□□□□□ -0.52
PrkcbP68404 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PrkcbP68404 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PrkcbP68404 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
PrkcbP68404 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PrkcbP68404 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
PrkcbP68404 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PrkcbP68404 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PrkcbP68404 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
PrkcbP68404 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
PrkcbP68404 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
PrkcbP68404 Gm6768-201ENSMUST00000022467 1878 ntBASIC11.8□□□□□ -0.52
PrkcbP68404 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.8□□□□□ -0.52
PrkcbP68404 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PrkcbP68404 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PrkcbP68404 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.8□□□□□ -0.52
PrkcbP68404 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
PrkcbP68404 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.8□□□□□ -0.52
PrkcbP68404 Gm38312-201ENSMUST00000195426 1746 ntBASIC11.8□□□□□ -0.52
PrkcbP68404 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
PrkcbP68404 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PrkcbP68404 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms