Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rrp1P56183 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rrp1P56183 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rrp1P56183 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rrp1P56183 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rrp1P56183 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rrp1P56183 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rrp1P56183 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rrp1P56183 Gm5159-201ENSMUST00000212733 1652 ntBASIC12.3□□□□□ -0.44
Rrp1P56183 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rrp1P56183 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Rrp1P56183 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rrp1P56183 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rrp1P56183 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rrp1P56183 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rrp1P56183 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rrp1P56183 Gm9062-201ENSMUST00000117712 727 ntBASIC12.3□□□□□ -0.44
Rrp1P56183 Gm9133-201ENSMUST00000118289 540 ntBASIC12.3□□□□□ -0.44
Rrp1P56183 Gm12986-201ENSMUST00000119037 967 ntBASIC12.3□□□□□ -0.44
Rrp1P56183 Gm12337-201ENSMUST00000119634 400 ntBASIC12.3□□□□□ -0.44
Rrp1P56183 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.3□□□□□ -0.44
Rrp1P56183 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.3□□□□□ -0.44
Rrp1P56183 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rrp1P56183 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.3□□□□□ -0.44
Rrp1P56183 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.3□□□□□ -0.44
Rrp1P56183 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.3□□□□□ -0.44
Rrp1P56183 Gm4753-201ENSMUST00000188327 1255 ntBASIC12.3□□□□□ -0.44
Rrp1P56183 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC12.3□□□□□ -0.44
Rrp1P56183 Gm10774-201ENSMUST00000188689 204 ntBASIC12.3□□□□□ -0.44
Rrp1P56183 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.3□□□□□ -0.44
Rrp1P56183 Gm44315-201ENSMUST00000203041 219 ntBASIC12.3□□□□□ -0.44
Rrp1P56183 Gm19091-201ENSMUST00000208120 978 ntBASIC12.3□□□□□ -0.44
Rrp1P56183 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rrp1P56183 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rrp1P56183 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Rrp1P56183 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.3□□□□□ -0.44
Rrp1P56183 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rrp1P56183 Gm5451-201ENSMUST00000080545 579 ntBASIC12.3□□□□□ -0.44
Rrp1P56183 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rrp1P56183 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rrp1P56183 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rrp1P56183 AC154220.1-201ENSMUST00000225033 1705 ntBASIC12.3□□□□□ -0.44
Rrp1P56183 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rrp1P56183 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rrp1P56183 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rrp1P56183 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rrp1P56183 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rrp1P56183 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rrp1P56183 Gm45089-201ENSMUST00000208082 2040 ntBASIC12.3□□□□□ -0.44
Rrp1P56183 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rrp1P56183 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rrp1P56183 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rrp1P56183 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rrp1P56183 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rrp1P56183 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rrp1P56183 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rrp1P56183 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rrp1P56183 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC12.29□□□□□ -0.44
Rrp1P56183 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rrp1P56183 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rrp1P56183 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rrp1P56183 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rrp1P56183 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC12.29□□□□□ -0.44
Rrp1P56183 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rrp1P56183 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rrp1P56183 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rrp1P56183 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rrp1P56183 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rrp1P56183 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rrp1P56183 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rrp1P56183 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rrp1P56183 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Rrp1P56183 Gm23272-201ENSMUST00000104053 129 ntBASIC12.29□□□□□ -0.44
Rrp1P56183 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rrp1P56183 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC12.29□□□□□ -0.44
Rrp1P56183 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.29□□□□□ -0.44
Rrp1P56183 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.29□□□□□ -0.44
Rrp1P56183 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC12.29□□□□□ -0.44
Rrp1P56183 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rrp1P56183 Gm44323-201ENSMUST00000198689 129 ntBASIC12.29□□□□□ -0.44
Rrp1P56183 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rrp1P56183 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rrp1P56183 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.29□□□□□ -0.44
Rrp1P56183 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rrp1P56183 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rrp1P56183 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rrp1P56183 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rrp1P56183 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC12.29□□□□□ -0.44
Rrp1P56183 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rrp1P56183 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rrp1P56183 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rrp1P56183 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rrp1P56183 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rrp1P56183 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rrp1P56183 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rrp1P56183 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rrp1P56183 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rrp1P56183 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rrp1P56183 Gm45124-201ENSMUST00000206723 2755 ntBASIC12.29□□□□□ -0.44
Rrp1P56183 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms